| Annotation |
|---|
| Description | jgi|Araly1|479163|fgenesh2_kg.3__1864__AT3G16950.2 |
| Sequence |
GGGGCTTTGA AATCTCCGCC TCCGTTGTTG GCTATTTACA CTCACTCTGT CTCCGCCGGT TGATTTCTCA TCTGCTTCTT CCTCTGTTCT CTCTCTCTCT GTCTCTGTCT TATACAATGC AATCAGCTAT GGCGCTTTCG TTCTCCCAGA CGTCGTTTAC AAGACCAAAC CACGGACTTG GATCAACTGG TTCCGTTTTT TCTACGCCTA CAAGTCTCCG GTTCTGCGGA CTCCGGCGGG AAGCGTTTGG TTTCTCTCCG TCGAATCAGT TGGCTTTGAA CAGTGAACGA ATTCGATTTC CAAGTAGGAA ATCATTCCAA GTCTCCGCTT CTGCTTCGAG TAATGGTAAC GGCGCTCCGC CTAAATCTTT CGATTACGAT TTGATCATCA TCGGAGCTGG AGTTGGTGGC CACGGAGCTG CTTTGCACGC CGTTGAAAAG GGACTTAAAA CTGCCATTAT AGAAGGAGAT GTTGTTGGAG GGACTTGTGT TAACAGAGGA TGTGTACCTT CCAAAGCTCT TCTTGCTGTT AGTGGTCGAA TGCGGGAACT TCAGAACGAA CATCACATGA AGTCCTTTGG TCTCCAGGTT TCAGCTGCTG GGTATGATCG TCAGGGTGTG GCAGACCATG CTAATAACCT GGCTACCAAA ATACGAAACA ATCTGACCAA TTCAATGAAG GCACTTGGTG TTGACATATT GACTGGATTT GGCAGTGTTC TGGGTCCACA AAAGGTTAAA TATGGGAAGG ACAATATTAT CACTGCAAAA GATATAATCA TTGCCACTGG ATCTGTGCCG TTTGTCCCTA AAGGCATTGA AGTTGATGGA AAGACTGTAA TCACCAGTGA CCATGCTTTG AAATTGGAGT CTGTCCCTGA GTGGATTGCA ATTGTAGGAA GTGGTTATAT TGGTCTTGAG TTCAGTGATG TTTACACAGC ACTTGGAAGT GAGGTAACTT TTATTGAAGC ACTGGATCAG CTAATGCCTG GATTTGATCC TGAAATCAGT AAGCTAGCTC AGAGGGTTTT GATAAATCCA AGAAAGATTG ACTATCATAC TGGAGTCTTT GCAAGCAAAA TTACTCCAGC AAAGGATGGG AAACCAGTTT TGATTGAGCT TATTGATGCC AAAACCAAGG AACCTAAGGA TACCTTGGAG GTAGATGCTG CTCTTATTGC TACTGGAAGA GCTCCATTCA CCAATGGACT TGGCTTGGAA AATGTCAATG TCGTGACACA GAGAGGTTTC ATACCAGTTG ATGAGAGAAT GCGTGTGATC GATGGAAATG GGACTCTGGT TCCGAACTTG TACTGCATTG GTGATGCCAA TGGTAAATTG ATGCTTGCAC ATGCAGCCAG TGCCCAAGGA ATTTCTGTGG TCGAGCAAGT CAGCGATAGA GATCATGTGC TTAATCATCT TAGCATCCCA GCTGCTTGCT TTACTCATCC TGAAATCAGC ATGGTTGGAT TGACAGAGCC TCAAGCGAAA GAAAAAGGCG AGAAGGAAGG ATTTAAAGTT AGTGTTGCCA AGACAAGTTT CAAGGCTAAC ACAAAGGCCC TAGCTGAAAA TGAAGGAGAA GGAATCGCAA AGATGATATA CCGACCTGAC AACGGTGAAA TCCTAGGAGT TCATATATTT GGACTGCATG CAGCTGACCT TATCCATGAA GCTTCTAATG CGATCGCTCT AGGAACACGC ATTCAGGACA TAAAATTGGC AGTTCATGCA CATCCAACAC TGTCTGAGGT TCTCGACGAA CTGTTCAAAG CAGCCAAGGT TGAAAGTCAT GCTACGACAA GGACAGGAGA TGCAAAGATA AAGCTAAACA CGAACCAGGA AGATCAGAGA GGAGGAGATG ATGGGAAACA ACCTTCAGTA AGTAAAGACT TAAAAGATAT ATCTACAAAG CCTTCTTCTT TCTTTGAGAA TATTTATGTT GGAGTCTTGT CTCTGCTTTC ACGTATATTT GTTTAATTGG TCCATGGTTT CGATTAGTGG AGATTGTGCT TCTGATTTTT GTATGTTTGT TTGAAGTGAG ATTTTGGAAG ATTATTCTCT TTTTA |
| Length | 2065 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 6827071.. 6831019 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G16950.2 |
| Description | lipoamide dehydrogenase 1 |
| TAIR curator summary | encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds. |
| Alias | [LPD1][ptlpd1][lipoamide dehydrogenase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg482467 | N-acetylglucosamine-1-phosphate uridylyltransferase 2 |
| 9.59166 |
Ahg925396 | TRAF-like family protein |
| 20.9762 |
Ahg473448 | plastid developmental protein DAG, putative |
| 23.0434 |
Ahg314880 | NPK1-related protein kinase 2 |
| 36 |
Ahg483631 | PLAC8 family protein |
| 38.9487 |
Ahg494989 | hydroxyproline-rich glycoprotein family protein |
| 40.6571 |
Ahg488180 | Protein of unknown function (DUF155) |
| 41.5692 |
Ahg495015 | FAD/NAD(P)-binding oxidoreductase family protein |
| 43.6348 |
Ahg493633 | histidine kinase 2 |
| 44.0114 |
Ahg490828 | LisH/CRA/RING-U-box domains-containing protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|