Detail



ID : Ahg494989

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494989|fgenesh2_kg.8__805__AT5G49280.1
Sequence
TTCTTCTTCT TCTTCTTTCC CACTCCTACA GTCTTTCTCC CTCCTCTCTC GCTCTCTCAT CTTCTTCCTC TGTATATTTT ACACAAAACT AAGTTTCTAA ATCCAATTTC TGACAATGGA AACAAACCAT TTATACACTT TTTCTACACT TGTTGTTATA CTGCTAATGT CAGTGACACC GACAGTAACA TCTAAAGACG AGGTTGTTTC TTGTACAATG TGTTCTTCAT GCGACAATCC ATGTAGTCCC GTCCAATCTT CTCCACCGCC CCCTTCTCCT CCACCACCGT CAACCCCCAC GACCGCATGT CCTCCCCCTC CTTCTCCTCC AAGCTCCGGT GGCGGTAGCT CTTACTATTA CCCTCCTCCT TCTCAGTCCG GTGGAGGCGG CAAATACCCT CCACCTTACG GTGGCGGTGG TCAAGGTTAT TACTATCCTC CGCCGTATTC AGGAAACTAT CCTATGCCGC CTCCGCCGAA TCCGATCGTC CCTTATTTTC CGTTTTACTA TCATACTCCA CCACCAGGTT CTGGTTCAGA TCGGTTTATG AGTTCTTGTT CTATTATTTT TACTTTTTTT GCTGTCTTTC TCTGTTTAGT GTGACGGATA AATATTCGGA AATTCGCCGG AAATTTATGA AGAAAAAAAT CGAAATAATG TGGCAGATCG GTAGATCTAT AAATGTTTAG ATATCTTTGA TCATGGAAAC AAGATGATGT TGGATCTTTT ACTTTCTTCG ATCTGTTTTA ACTTTTTCTT TTGTTGTTGA CAATTTGTAT TTAATTGATC TTGACAATTA ACATACTTAA TTACTCGTTA TTCAGATTTC AGAAATAAAG AATTGTTACT TTC 
Length853
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12223462.. 12224346
Download Sequence
A.thaliana
AGI-codeAT5G49280.1
Descriptionhydroxyproline-rich glycoprotein family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6 Ahg333020 endoplasmic reticulum retention defective 2B
8.94427 Ahg476633 TIFY domain/Divergent CCT motif family protein
24.1247 Ahg494617 Protein of unknown function (DUF3741)
24.4949 Ahg472912 ARM repeat superfamily protein
24.7386 Ahg330953 plant defensin 1.3
29 Ahg490626 myb domain protein 4
32.249 Ahg480424 Tetratricopeptide repeat (TPR)-like superfamily protein
36.0555 Ahg470210 S-adenosylmethionine synthetase 1
38.9487 Ahg479163 lipoamide dehydrogenase 1
41.3521 Ahg483469 Chitinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression