Detail



ID : Ahg479629

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479629|fgenesh2_kg.3__2330__AT3G21100.2
Sequence
TTACTCTGAA TATGGATCCG GGAGATCCTA CTTCGATACT TTTCACAAAG ATCAGAACTT TAGAACCAGA CTTCGCTTCA AAAATCATTG GTTACTTGCT TTTACAGGAC TTGGGTACGA GAGATTTGAT GCGTTTGGCT CTTGGACCAG ACACTCTCTT GCAGTCCGTT TGTCTCAAAG CTAAATCTGC TTTAGGTCTT TCTTCTAATG GATCTTCTTC TGCTTCGTCG CCATTGAACC CTATCTCCAG ACCCATTAAC ATCCACCGTC ATTCTCTGTC TCAGTCTTCA CCGGGAAATG GGTTTGTGGA GTTTTCGAGG AACAACCCTT TGTCTCCTTC TTTGACTACT CCTGGTTCAC TCGGAAGTAA CCCTAACATG ATTTCGAGTC CGTTTCAAGC AAGTTCGTCT CTTTTTGCTT CTAACGGTGG TGCTGCTGGT GATTCCACTG GAAACGGCGA TTTCCTCGAT GAGCAGCAAC TAGGGAACTA CTTGTCGTTT CTTAACGAGT CTTCTTCGAA GAATAACGAC GAATCTCTGG ATCCGTTTGG GTTCTCTGCT GATAATGGCG ATGCCCATTT GCATAAGAGG AGTTTCTCTG CCAGTGATGC TTGTTTCGGG TCAGAGGAGC CCGGATTTGG CGGCGGCGGT TACAATAGGT TCCCTCACGG TGGTTTAGGT GATGATTTTG ATTCTCCTGG TGGTTTTGGC TCGCCGGATT ATGTTTCCAG ACAGCAAGAG GAGATGGTGA GGATGAAGAT GGCTCAGAGG CAGCGAATGG CCGCTGCTCA GTACTTGGCG GCTACTGGTT CTCCAATGTC GTATGAAAAA GGCCTCAATT TTCTCTTGCA TCAACGTAAT GCGCATAGAT CAGGAGCAGG ACAATATGGG GAAGAGGGTT ACTGGTTTGG TAGTCCAGGC CGGCATGAAA GGGATGAGTT TATGGGAATG GGAGATAAAT CTAACTCTGC TTCTAAACAG ATTTACTTGA CATTTCCAGC TGACAGCTCC TTCACAGATG AAGATGTCTC CAATTATTTT GGCACTTTTG GACCAGTGCA AGATGTTAGG ATTCCATACC AGCAGAAACG GATGTTTGGG TTTGTCACTT TTGTCCACTC TGAAACTGTG AGAATCATAT TGGCTAGAGG AAATCCTCAT TTCATCTGTG ACTCACGTGT GCTCGTTAAA CCGTACAAGG AGAAGGGAAG AATCCTTGAA AAGAGGCAGC AGCAACAACT GCTGCAGCAG ATGGAGAGAG GAAACTTTTC TCCTGGTTCA AGTCCATCTG GAATGGATTC CAGGGATCTC TTTGAATCTC TTCTCTCACC AAGGATGTTT TCGAACACAC AGGAGATGAT GAGGAGAAAA GCTGAGCAAG CTGACCTGCA ACAAGCAATA GAATTCCAGA GGAGAAGATT TCTGAATCTG CAGTTGCCCG ACATGGACAG TGAATCGTTT CTCCATCACC AGCGTAGTCT TTCTATTGGA TCTCCCGTTC ATTTTTCCCC TCGTGTCAAT CAAAGCATGC TCTTTCGATC AGAAAACACC AGTGATGAAG TCTTCGAAGG TAATGGTGAT TCAGGACATT TTCAGTCTGA AGCAACCCGA GCTTTTCTGA GTGATACTGG TCACAACAGC AGCCAAGAAC GTGTTTACAA TAACCATCTC AACAAAGGGC AAGAGACAAG TCTGGAGAAC GCTCTGCCTG ATAGCTTCTT TGCTTCCCCA TCGAAGACCG GTGAAACCCA ACACCCCGAG TTTGAGAAAG AGAATTGTGC TACACTCGCT GTTACTACAG AAAATAAGGC AGCCTCGTCA ATTCAATCAG CCTAGCAATT GGTTCGATAG AAGCAGGAAG AAAGTGAGAA AAGTTTCTTT GGTTGCAGAA AAGTAGAGAC TGATAAAAGG AAGAAGTAGA AGAATTTTGT CTATATGTAG AAGCTAAAGA AGGTTTTATA ACATGGAACA GAAAGAAGGG TAGGGAGACC AGTTAGGATT TTACATATCT CGAAAAAGGC AGTTGTGGAA TGCCAATCTG CAATAGAAAT TTACAGCTAA GTACTAACCT CGACAAAGCA TTGATAGGCA GAACAATACA GTGACTGAAA CCTTCAAGTT TTAAGTTTCC GTCTGTTCAT CGATGATTGT TTACCTTTTT ACCAGGTCAT AAGCCCTGGT TCTGGACAAG GCTACTTCAG TTGTCAATAT AGATGAATGT CTTTTT 
Length2226
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8781437.. 8784679
Download Sequence
A.thaliana
AGI-codeAT3G21100.2
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg473277 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
4.24264 Ahg477950 HCO3- transporter family
4.47214 Ahg919579 Endomembrane protein 70 protein family
15.4919 Ahg888778 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
16.7929 Ahg487406 Putative methyltransferase family protein
18.735 Ahg927786 Plant protein of unknown function (DUF827)
18.868 Ahg473256 auxin response factor 6
22.9129 Ahg888428 compromised recognition of TCV 1
23.1517 Ahg486889 HEAT repeat ;WD domain, G-beta repeat protein protein
23.4521 Ahg946908 RNA polymerase Rpb7-like, N-terminal domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression