Detail



ID : Ahg479637

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479637|fgenesh2_kg.3__2338__AT3G21175.1
Sequence
AATAAAAAAT CAAAGGAGCT TCCTTTTTTT CGCTCTCGTC TCCGTTTACC CTTTTGGCTC ATTGTAGAAT CAAATCCTCT TTATCTTTCA CTGTTTCGCG TGAATTAGCT CTGAAAAGGT TCTTCATTCT TCTCCCTTGG ATTGCTCTGA ACAAAAGAAT AAAGACCATG GATGAACTTC ATGGAAACAA TGGTCGTATG CACATTGGCG TAGCGCAAGA TCCAATGCAT GTGCAGTATG ATCATCACGG CTTGCACCAT ATCGACAATG GAAACGGTAT GATGGATGAA CATACTGATG GTGGGATGGA TGAAGGAGTG GAGACAGACA TTCCTTCCCA CCCTGGAAAC GCAGCTGATA ATCGCGGTGA AGTTGTAGAC CGTGGTATTG AAAATGGAGA TCAATTGACA TTGTCATTCC AGGGACAAGT TTATGTTTTT GACCGTGTCT CGCCTGAGAA GGTTCAAGCT GTCCTTTTGT TACTTGGTGG ACGTGAAGTA CCACAGACAC TCCCGACATC CCTAGGATCA CCTCATCAGA TCAATAGGGT ACTGGGTCTA TCTGGTACTC CTCAACGGCT TAGCGTCCCG CAGCGGTTAG CTTCTTTGCT CAGATTTAGG GAGAAACGAA AAGGGAGGAA TTTTGATAAG ACAATTCGCT ACACAGTCAG GAAAGAGGTA GCCTTGAGAA TGCAACGTAA GAAAGGACAG TTCACATCGG CTAAATCAAG CAATGATGAT TCTGGATCCA CTGGATCGGA TTGGGGGTCA AACCAGAACT GGGCCATAGA AGGGACTGAG ACTCAGAAGC CAGAGGTTTT ATGTCGACAC TGTGGAATAA GTGAGAAGTC AACTCCAATG ATGCGACGTG GACCTGATGG GCCAAGAACA CTTTGTAATG CATGTGGACT AATGTGGGCA AACAAGGGAA CTCTTAGAGA CTTGTCCAAA GTCCCTCCAC CTCAAACACC TCAGCATCTA CCTGTGAATA AGAATGAGGA TCCAAATCTT GAGGCTGATC AAATGAATGG AGTAGCTGAT GACATTAGCA ACTCACAGTG AGAACTGAGA AACCATTCAA GCAAGAAATT ATCTCAACAG AAACAGTTAT CATTTTCTTT TATGATGGAA TCGAATCTGA GTTGGGTTTA GGGTTTCTCT GGGTTCATCT GAGTCTTTGT GGACACCTTT TAATCTTTTA CAAATTATAA GATACTCTTC ACTTATTTAG AAGCTCACTC ATCAGAAAAG AAAAAAAAAA CTTTCCTCAG TGTCTCATCT GTGTTTTGAT TATAATTAGT TAAA 
Length1304
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8817099.. 8819975
Download Sequence
A.thaliana
AGI-codeAT3G21175.1
DescriptionZIM-like 1
TAIR curator summarymember of a novel family of plant-specific GATA-type transcription factors.
Alias[GATA24][TIFY2B][ZML1][ZML1][GATA TRANSCRIPTION FACTOR 24][ZIM LIKE 1][ZIM-like 1]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg918657
5.56776 Ahg492675 Protein of unknown function, DUF584
7.48331 Ahg895646
8.83176 Ahg338119 Disease resistance protein (CC-NBS-LRR class) family
10.247 Ahg912904
13.3041 Ahg887877 Disease resistance protein (CC-NBS-LRR class) family
13.6015 Ahg470343 Cystatin/monellin superfamily protein
14.0712 Ahg493547 Pentatricopeptide repeat (PPR) superfamily protein
14.6969 Virus3631
17.6635 Ahg486339 metal tolerance protein A2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression