Detail



ID : Ahg479647

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479647|fgenesh2_kg.3__2348__AT3G21280.1
Sequence
GGTTTTAGGT CTGATGTCTT TAAACCCGAC CCGACTAAAC CCGGCCCGAC CCACCCGGTT CGGGTATTGG CGTATTTATT AGAGACGAAT TCAGAAGAAG AAGGCAAGTT TTTATTTATT TCGTTTGCCT TGTCTTCAAG AAATCAATCA ATCTCGTTTC TCTTCGTCAT CGAACAATGT TAACAGTGAG CGTGAAGTGG CAAAAGAAGG TGTTTGAGAG TATGGAGATT GATACTCTCC AGCCTCCTTA TGTATTCAAG GCTCAGTTGT ATGATTTGAG TGGAGTACCG CCTGAGCGGC AAAAGATCAT GGTCAAAGGT GGACTTTTGA AGGATGATGC AGATTGGTCT ACGTTGGGAC TCAAAAATGG TCAAAAATTG ATGATGATGG GAACTGCAGA TGAAATAGTC AAGGCTCCAG AGAAGGGTCC TGTTTTTATG GAGGATCTTC CTGAGGAGGA ACAAGCCGCT AATCTGGGTT ACAGTGCTGG CCTAGTCAAT CTTGGAAACA CCTGCTACAT GAACTCAACG ATGCAGTGTT TAAAATCTGT CCCAGAGTTG AAATCTGAAT TATCCAATTA CCAATCTGCT CGAACCAAGG ATGTTGATCA GACTTCTCAC ATGCTCACAG TTGCAACACG TGAGTTATTT AGAGAGCTTG ATAAAAGTGT CAAGGCTGTT GCGCCTATGC CATTCTGGAT GGTGTTACAA AAAAAATATC CTCAGTTTGC TCAGTTGCAT AACGGAAATC ACATGCAACA GGATGCTGAA GAATGTTGGA CACAAATGTT GTACACTCTT TCCCAGTCCC TAAAACCGCC ATCGCCTACC GAAGATCCTG ATGCTGTGAA GGCTCTTTTT GGTCTCAACC TTCGTAGCAG GTTGCATTGC CAAGAAAGTA GTGAAGAAAG CTCGGAGACA GAATCTGTCT TTTCTCTGAA ATGTCACATA TCACATGAGG TGAACCACTT GCATGAAGGA TTAAAACATG GACTGAAAGG AGAACTTGAA AAAACATCTC CTGCTCTGGG TCGTACAGCG GTTTACATTA AGGAGTCTCT TATAGATTCG TTGCCAAGGT ACTTGACTGT TCAGTTTGTG AGATTCTTCT GGAAACGGGA GAGTAATCAG AAAGCAAAAA TTCTCCGGAA AGTGGATTAT CCGTTGGAGT TGGATATATA TGACCTTTGT TCTGAGGATC TTCGAAAGAA ACTGGAAGCT CCTCGCCAGA AACTGAGAGA TATTGAAGGT CAAAAGCTTG GTCTGCAAGC CAGTGCAAAG AGCAGCTCAA AGGGCGATGA TGTGAAAATG ACTGATGCTG AGGAATCATC AAACGGAAGT GGTGAGTCAT CCTCCGGTGA CCAACATGGA GGTGCTTCGT CTCACATGAC CGGAATTTAT GACCTGGTCT CAGTGTTGAC CCACAAAGGC AGAAGCGCAG ACTCTGGGCA TTATGTTTCA TGGGTCAAGC AAGAGAGTGG TAAGTGGGTT CAATACGACG ATGCTAACAC GAGCCTTCAA CGGGAAGAGG ATATCACTAA ACTCTCTGGA GGAGGTGATT GGCATATGGC ATACATCGTA ATGTACAAGG CCCGTCTCAT CTCCATGTAA TCTCTTCTCT TTTCATTATC TCAGTTCTTG AAACATTTAG ATCGCTTAAG CTTTTTTTTG TATAGACCAT CTTCATGCTC CTCTTTGTAG AAATTTCACA TTATTTTTTG TTGTCGTCAT TAAAATGTTA TAAACCAGAA AACTAAAATA AAAGTTCTGT TTTTTTTTAG AGGTCCCAAT CTG 
Length1793
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8881937.. 8885854
Download Sequence
A.thaliana
AGI-codeAT3G21280.1
Descriptionubiquitin-specific protease 7
TAIR curator summaryEncodes a ubiquitin-specific protease.
Alias[UBP7][ubiquitin-specific protease 7]
Gene coexpression
MR
MR Locus Description
20.9762 Ahg939388 zinc finger (C3HC4-type RING finger) family protein
30.4959 Ahg491814 Regulator of Vps4 activity in the MVB pathway protein
35.2704 Ahg477335 Ribosomal protein L13 family protein
38.1576 Ahg489809 calcium-dependent protein kinase 4
59.2621 Ahg934754 ubiquitin-protein ligases
67.3944 Ahg496142 nuclear RNA polymerase C1
72.8697 Ahg497034 kinesin-like calmodulin-binding protein (ZWICHEL)
76.1906 Ahg921003 Pseudouridine synthase family protein
94.9842 Ahg476922 Plant protein of unknown function (DUF869)
95.4882 Ahg339915 Acyl-CoA N-acyltransferases (NAT) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression