Detail



ID : Ahg479726

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479726|fgenesh2_kg.3__2427__AT3G22110.1
Sequence
AAGTTCTCAG CAAAATCAAA GAAGAACTGA AACGAGAGAG AAGCGAATTC TTCTCAGGTA ATGAAATTAC TCAATCTGTT TTCTTAAATG CTTCTTGTTG GCTTGTTGCC TCCATTTTGT TTTATGCGAA AACTGCAGTT TTTTTTTTGT TTCTGTAGTC GTCTTTACCA GGTAGAGTAT GCTATGGAGG CCATTGGAAA CGCTGGTTCT GCAATTGGAA TCTTATCCAA AGACGGAGTT GTGTTGATCG GTGAGAAGAA AGTCACCTCT AAGCTTCTTC AAACCTCAAC CTCTGCTGAG AAAATGTACA AGATTGATGA CCATGTTGCC TGTGCTGTTG CTGGTATAAT GTCTGATGCT AACATACTCA TCAACACGGC ACGAGTCCAA GCTCAACGTT ACACCTTCAT GTACCAAGAG CCCATGCCGG TTGAGCAGCT GGTTCAATCT CTCTGTGACA CAAAACAAGG CTACACACAA TTCGGTGGTC TTCGCCCATT TGGTGTCTCC TTTCTCTTTG CAGGATGGGA CAAGAACTAT GGGTTCCAGC TATATATGAG TGACCCGAGT GGGAACTATG GTGGTTGGAA AGCTGCAGCT GTTGGGGCAA ACAATCAGGC GGCTCAGTCT ATTCTGAAAC AAGACTATAA GGACGATGCA ACCAGGGAAG AAGCAGTCGA GCTCGCCTTG AAGGTTCTGA CCAAGACAAT GGACAGCACT AGCTTAACAT CTGAGAAGCT AGAGCTTGCT GAGGTGTATC TGACTCCATC CGGGAATGTT AAGTACCATG TTCACTCACC TGAGTCGCTC ACCAAGCTGT TGGTCAAGCA TGGTGTGACT CAACCGGCTG CTGAAACATC CTGAGCTCAA AAGAATCTCT AGTCTTTATT CGCCTGGTAC GGTGTCTCGG CTCTATGTTT GTAGTTCTCT GTTTTACAGC TTTCCTTTTG GTTTGAACTT TGAAGTTAAC TATGGCGATG AAACTAGATT TGACAATGTT AT 
Length1002
Protein Sequence
Protein Residue
Map Locationscaffold_3: 9244821.. 9246510
Download Sequence
A.thaliana
AGI-codeAT3G22110.1
Description20S proteasome alpha subunit C1
TAIR curator summaryEncodes the alpha-3 subunit of 20s proteasome.
Alias[PAC1][20S proteasome alpha subunit C1]
Gene coexpression
MR
MR Locus Description
9.59166 Ahg472896 TCP-1/cpn60 chaperonin family protein
10.3923 Ahg494573 CAP-binding protein 20
13.3417 Ahg480985 NAD(P)-linked oxidoreductase superfamily protein
14.6969 Ahg351112 RNA polymerase II transcription mediators
15.2971 Ahg939125 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
17.6635 Ahg480870 ATP citrate lyase (ACL) family protein
20.9762 Ahg491608 myosin heavy chain-related
23.8747 Ahg941384 tonneau 2 (TON2)
25.2389 Ahg322676 nonsense-mediated mRNA decay NMD3 family protein
26.4575 Ahg484397 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression