Detail



ID : Ahg479887

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|479887|fgenesh2_kg.3__2588__AT3G23710.1
Sequence
ATCATTTTCC CGAGAAAATA ATGAATTCAA ACATTTTCCC ACCATCGAAA CATCAAAACC AGTTTAAAAT ACAACAATCC TTCTCGAATC TCCAATCTCA ATGCTCCAAT CTACTCCACA ACGTTTCGCA AACCCTTAAT CCTCTCTTCA ACGCCAACAA GAACAACAAC CCTAATATCT TCTCTGCTCT CAATTCGTTT CGTGATCAAG CTAAGCAAGC TTTAGATTCT AGAATCTCTC GTTTCAATTC TGGTAAGGCA CCAGTTTGGG CGAGAATTTC TGACGACGTC GGTGGCGGTG GTGGTGCGAG GACTCAAGTG ACGGCTCCGG TTCGTGGAAG CGGGAAAGGA TTATCGGCTG ATGCTATTGA GGAGAGATTG GCGGGAGTTC CTGTTTACGC GTTGAGTAAT TCGAATGAGG AATTTGTGTT GGTTTCAGGG ACTTCTTCTG GGAAATCTCT GGGTTTGTTG TTTTGTAAAG AGGAAGATGC AGAGACGCTT CTTAAACAGT TGAAGAGTAT GGATCCTCGT ATGAGGAAAG AAGGTTCAAA AGTTGTTGCT CTTGCTCTTA GCAAGGTGTT TCAGTTAAAA GTTAATGGTG TGGCATTTAG GTTGATTCCT GAGTCTACTC AAGTGAAAAA TGCCTTGAAG GAAAGGAAAA CAGCTGGTAT CGATGATGAT GACTTCCATG GTGTTCCGGT TTTCCAGTCA AAGAGCTTGA TTCTACGAAG TGAAAACATG AGTTATCGCC CTGTTTTCTT CAGAAAGGAG GACTTGGAAA AGTCCCTAAT ACGAGCGTCC AGCCAACAGA ACCGACTCAA CCCTGCTCTG AAACCAGGCG ATATTCAGGT TGCAGTTTTT GAAGATATTG TCAAGGGAAT GAAGGAAAGC ACGACGTCGA ACTGGGACGA CATTGTGTTT ATACCGCCTG GTTTTGAGGT TTCAACTGAG CAAACCCAGG AGTAGGTGAA ATCCTTGGAG CATCGTAAAA CCTCAACCTC AAACTTCTCC ACTTTCATAT TCCTATCTCA TCATTCAACA ACTTGATGAA CACAGAGAGT TGGAAATAGC GTTGATGATG TTACCTCCAT TAACATCCTT CTCCAATCCT TGCTTTCTCT ATGTCGTCTT ATGAGGTTTT 
Length1140
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10315952.. 10318251
Download Sequence
A.thaliana
AGI-codeAT3G23710.1
DescriptionTic22-like family protein
TAIR curator summary
Alias[AtTic22-III][Tic22-III][translocon at the inner envelope membrane of chloroplasts 22-III]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg936247
10 Ahg486246 Domain of unknown function (DUF1726) ;Putative ATPase (DUF699)
16.1245 Ahg487368 nuclear pore complex protein-related
28.1069 Ahg487450 DNAJ heat shock N-terminal domain-containing protein
31.749 Ahg354992 Pentatricopeptide repeat (PPR) superfamily protein
34 Ahg486557 actin-related protein 7
34.9857 Ahg487419 splicing factor-related
39.95 Ahg486216 nuclear RNA polymerase A1
41.1096 Ahg495232 cleavage and polyadenylation specificity factor 160
47.6235 Ahg916255 Zinc knuckle (CCHC-type) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression