Detail



ID : Ahg480045

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480045|fgenesh2_kg.3__2746__AT1G27190.1
Sequence
AACTAGATCC ATCCATTATC ATGAAGAAGA TCTTCATCAC ACTCTTATGG CTTCTCTTTA TAAGCTCGTT TCTCTGTTCT TCTTCTTCAG CTGAAGACGA CGTTCTTTGT CTCCAAGGTT TGAAAAACTC ACTCATCGAT CCATTATCTA GACTCAGTTC CTGGTCTTTC CCAAACTCTT CAGCTTCTTC GATTTGCAAG CTCACTGGTG TTTCGTGCTG GAACGAGAAA GAGAATCGGA TTATTTCTCT TCAGCTTCAA TCGATGCAGC TCGCCGGTGA GATTCCTGAG TCTCTTAAGC TTTGTCGTAG AATGTGGCCT AACTTAACCC AAAAGCTAGC TCAAGAGTTA AGGATTGCCA CATCCTTTAT ATACTACCCA AAGATCTTAA TCCCAAGCAA TGTGGGACAT TCTAATAGGC CTCCTCGAGA TGTGGGTGGG AAACGGTCCA ACGGGAAACA GCCCAAGCCC AACATCTCGG AAATACAACA AGACATGCCA CTTATATGGA TTCCTTCTCA AATCTGTTCT TGGCTTCCCT ATCTCGTTAC GTTAGATCTA TCTGGGAATA AGCTTGGTGG TTCGATTCCT ACTCAGATCG TTGAGTCTTT CTGCTTCGAC GTCTTTCTCT TGCTGGGAAT GATCTCTCCG GTGCGATTCC TTCCGAGCTG GCGCGGTGGA TTCGGAGGAG ACGATTTTAG CGGGAATAAC GGACTTTGCG GGAAGCCTTT ATCGAGATGT GGTGCGTTGA ATGGGAGAAA TTTGAGTATT ATTATTGCTG CTGGAGTTAT TGGTGTCGTT GGATCTTTGT GTGTTGGTTT AGTGATATTT TGGTGGTTCT TTATTAGAGA AGGTAGTAGG AAGAAGAAAG GTTATGGTGC TGGGAAGTCT AAGGATGATA GTGATTGGAT TGGTTTGTTG AGGTCACATA AGCTTGTTCA GGTGACTTTG TTTCAGAAGC CCATTGTGAA GATTAAATTG GGTGATTTAA TGGCTGCTAC GAATAATTTT AGTTCAGGGA ATATCGATGT TTCGTCGAGG ACTGGGGTTT CGTATAAAGC GGATTTACCT GATGGGTCTG CGCTTGCGGT GAAGAGGCTT AGCGCTTGTG GGTTTGGTGA GAAACAGTTC AGGTCGGAGA TGAATAGGTT AGGAGAGCTT AGACATCCGA ATTTTGGTGC CGCTTTTAGC ATATGCCTAA TGGCACGTTG TTTTCTCAGT TGCACAATGG TGGATTGTGT GATGCTGTTG GATTGGCCGA CTCGGCTTGC GATTGGTGTG GGAGCTGCTA AAGGGTTAGC TTGGCTGCAT CATGGATGCC AACCGCCGTA TTTGCATCAG TTCATTAGTT CCAATGTTAT ACTTCTTGAT GATGATTTTG ATGCTCGGAT AACGGATTAC GGTTTGACAA GGCTAGTTGG ATCTCGCGAT TCTAGCGATA GCTCGTTCAA TAATGGGGAT TTGGGGGAGT TAGGTTATGT GGCGCCTGAG TATTCGAGCA CCATGGTTGC ATCTTTGAAA GGAGATGTGT ATGGGTTTGG AATTGTACTT CTTGAATTTG TTACTGGGCA AAAGCCTTTA TCTGTTATTA ACGGTGTGGA AGGGTTTAAA GGGAGTTTAG TTGACTGGGT GAGTCAGTAT TTGGGGACTG GTAGAAGCAA AGACGCTATT GATAGAAGCA TATGTGTTAA AGGACACGAT GAGGAGATAT TGCAATTCTT GAAAATCGCA TGTAGCTGTG TTGTGTCCAG GCCTAAGGAA AGGCCAACGA TGATTCAGGT GTATGAATAT TTGAAGAACA TGGCGGATAA ACACGGTGTT TCTGAGCATT ACGATGAATT TCCACTGGTC TTCAACAAAC AAGAACCTTG AGTATCTTAC CAGAAAGTAG TCTTTTTTGG CAGCTTAAGC GCTAAAAAGG TATGAGAAAT CTACTTT 
Length1937
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12125671.. 12127957
Download Sequence
A.thaliana
AGI-codeAT1G27190.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
30.9193 Ahg892274 SGNH hydrolase-type esterase superfamily protein
38.9102 Ahg906792
54.8544 Ahg342636 AP2/B3-like transcriptional factor family protein
56 Ahg476978
61.3188 Ahg488876 Proline-rich extensin-like family protein
66.3325 Ahg494865 Pectin lyase-like superfamily protein
70.1498 Ahg491276 Leucine-rich repeat (LRR) family protein
75.2596 Ahg359114 transposable element gene
79.0253 Ahg323966
87.43 Ahg347223 Proline-rich extensin-like family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression