Detail



ID : Ahg480484

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480484|fgenesh2_kg.3__3185__AT2G19870.1
Sequence
CTGGTCTCTC TCTTAAACCC TAAAAAAAAA ATCTCTGGTA GTCAGATTGG TCTATCAATG GGAGAATCTT CAAATACCAT TTTCTAATAG CTCTTCGTTT ATAAAATTCA CCTTTCTCCA CCGGAAAAAG TTGGATTTTT CTCTCTTCTG TTTACTCCGA AATCATGTAC TGTAATTTAA CAAGAAGCCA AGGATTTCCA ATGGCGATTA GGGTTTCATT ACAACAAACA ACAATCCAAA GCTGTTTCCA ATTCTCAAAG TCTTTGTATT TACCAGTTAA GTTTCATTTA AACCCTAAAG GAAGAGCCTT TGCAAATGTT TCCACTGGTT TAGTTAGTTC TCGTCTTAAT TCTATGAAGA TTGGAATGTT GAGGAAACCT GTAAGTGTTA GAGAGTTTTC GAGTTTTGAT TCTCAGAGAT TTGGCAAACG AAGTAGTAAT AGTAGTAGTA GAGGGAAGTC AGGATTAGGA TCAAAAGCTT TCCGAGAGAA GAGAAGTGGT GGTAATGGCC GTTCTAGTGG AGATTCGATT TGGGTGAAGT CTGATGAGAA ACCAGTGGAA GAAAGGTTTC AGAGAGGTGA TAGGCCTTCT TGGGAGAAAC GAGATGGTAG AAGTGATTCG GTTTCTGATA GGAGAAGTAG ATTCAGAGGT TATGGTGAAA CGAGGAATCG AGATTCTTTT CGTGATCGAA GAGATGATAG AATCAGTGAA GTGGAAGAAC AAAGTAAGAA AGGTAGTGGG AATTCAATTT GGGTGGCTAA TGATGATAAA CCGGCGAAAG AGCAATTGCC GAGAGTTAAC AACAGGTCAT CTTGGGATGA TAGAACAAGA AATCAGAACT CTTTTAGTGC CCGAGGTGAT GATAGAATCG CTGAAGAAGT AGAAGACGAA ACTGAGAATC ATGGCCGTGA TGACGGTGAT GGAATCATTG AAGAAGAACC AGATAATACT AGGTGGTCTG AGATCAAAAA TAGGTTCAAT AGGTATGATG TAAGAGATCA AGGACGCGAT AATGCAGCAT ATCGAAACTG GAATAGGCAA GAGAGCTGGG GTAGGAAAAC ATGGCAAGAG GCGACTGAGT CCAGCGTACC TAGGCTGGAG GGTGAAGTGG TCTATGGAGT AAGTCCAGTG TTAGCTGCAC TCTCTGTTGG GAGACGAGAG TTCTATGCTC TCTATGTTCA AGAAGGTTTA GACTTGAGCA GTAACAATAG GAAGAAGAAA GACAAGAAAG GGTTCGAGAA AGTCTTGAAA ATCTCCGAAA AGCTCGGGTT AAACCTCAAG GAAACTTCGA AGCATGATCT TAACATGGTC GCTGATAACA GACCACATCA AGGATTGGTG CTTGATGCTT CTCCATTAGA ATTGGTGAAA GTGAAAGAAC TAGATCCGAT TTCATCAGAG GAAGAGAAAT ATTCTCTTTG GGTAGCTCTT GATGAGGTCA CTGATCCGCA GAACTTAGGC GCGATCATAA GATCTGCTTA CTTTTTTGGA GCAACGGGTG TTGTGGTATG CGCGAAAAAC TCAGCTCCAT TAAGTGCGGT TGTGAGTAAA GCAAGTGCTG GATCACTCGA AGTTATGGAA CTCAGGTACT GCAAAAACAT GATGCAGTTT TTAGAAGCTT CTGCTGAGAA CGGTTGGCGT GTAGTTGGTG GTTCGGTATC TCCAAAGGCT GTTGCTTTGA ACGAGGTTTT ACCCGGCAGC CCGACAATAC TTGTCTTGGG GAATGAAGGA ACGGGTTTAA GGCCATTAGT AGAGCGATCA TGTACCGAAT TAGTCAGGAT TAGTGGTAAT ATGCCCAATG ATGTTGCAGT TACAGAGTCT GATGATGCGG AAGGTGAAGG TTTCAGATCA TTTCTTGCTG TGGAGAGCTT GAACGTGAGT GTTGCAGCTG GTTTGTTTCT TCATCACTTA ATAGGCAACA AAGCAAGTGC TTGATTCCTC CTTGCGTTCT TCGTATCAAT TACATTTTTG CACCAAACTT GGGATTTGCT CTCTACTTGT ATAACTTTAT GCTCTCATTC TATGGTTTGT TTTCCTATCA TGACCTGATC TATCTATGCT CGAAAAGCCG CATTAT 
Length2076
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19676147.. 19678203
Download Sequence
A.thaliana
AGI-codeAT2G19870.1
DescriptiontRNA/rRNA methyltransferase (SpoU) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.58258 Ahg930508 dehydratase family
6.08276 Ahg316620 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases
6.9282 Ahg485806 fructokinase-like 1
10.2956 Ahg471334 Seryl-tRNA synthetase
12.6095 Ahg474991 P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
12.7671 Ahg925692 formyltransferase, putative
13.2665 Ahg927888 cysteine synthase 26
14.2829 Ahg943837 Protein of unknown function (DUF3414)
14.4222 Ahg472909 NAD(P)-binding Rossmann-fold superfamily protein
16.2788 Ahg949410
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression