Detail



ID : Ahg480516

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480516|fgenesh2_kg.3__3217__AT2G19560.1
Sequence
GAATACGAAG AAGAAGAAGG TAACAATGGC GTACGTTAGT ATGGGTGAAG CTCACCGGCG AATCACTGAA TACTTAAACC GTTTCTGCGA CGCCGTTTCG TACCAAGACT CTTCTACACT TTGCCGTCTC CTCTCTTTCT CTTCCAATTC TCCACCTCTT CTCTCACTCG CCGACGCAGT CAACGTCTTC CAGGTACATG CTAGCAGTTT GATTAGACAG TCTGATAAAT TCTCTGAATA TGGCGAGATT CTGGCTCATT TGTTTCGTTC TCTACAAAGT TACCGAGTTG GGAATCTAGT CGAAGCATAC CTCGCTTTCG AGAAGTTTGC CAATGCATTT GTTCAGGAGT TTCGTAATTG GGAATCTGCT TGGGCATTGG AAGCTCTGTA TGTTGTTTGT TATGAAATTC GAATTCTTGC GGAAAAGGCT GATAAGGAGT TAACTTCTAA TGGAAAATCT CCCGAGAAAT TAAAAGCAGC TGGATCTCTT CTCATGAAAG TTTTTGGAGT TCTTGCTGGG AAAGGTCCAA AACGAGTCGG AGCATTATAT GTGACTTGCC AATTGTTCAA GACCTACTTT AAGCTTGGAA CCGTCAATCT TTGTCGAAGT GTAATAAGAA GTATCGAAAC TGCTCGGATA TTTGACTTTG AGGAGTTTCC AAGAAGAGAC AAGGTTACAT ACATGTATTA TACCGGACGA TTAGAAGTCT TCAACGAAAA TTTTCCAGCT GCTGATACAA AGCTATCATA TGCCTTGCAA TATTGCAACC CCAAAAGAGA ACGGAATATA AGGATGATAT TGAAGTATTT GATACCCGTG AAACTTTCAA TAGGAATTAT ACCAAAAGAC GAGCTCTTGC AAAATTATAA TCTGCATGAG TATACAAAGA TTGTGCAAGC TCTGAGAAAG GGTGATCTCA GGCTTCTCCG GCATGCTCTT CAAGAACATG AAGATCGGTT CTTGAGGTCG GGTGTATATC TTGTCTTGGA AAAGCTAGAG CTCCAAGTCT ACCAGAGACT CATGAAGAAA ATTTATATAA TCCAGAAGCA GAGTGACCCA GCGAGAGCTC ACCAGCTGAA GCTTGAAGTG ATTGCCAAAG CACTAAGATG GCTAGAAATG GACATGGATC TCGACGAGGT GGAATGTATA ATGACGATTT TGATATACAA AAACCTTGTG AAAGGTTATT TAGCTCACAA GAGCAAAGTG GTAGTTCTAA GCAAGCAAGA TCCATTCCCT AAACTTAACG GGAAACCGGT TGGCTCATAG 
Length1270
Protein Sequence
Protein Residue
Map Locationscaffold_3: 19844579.. 19847594
Download Sequence
A.thaliana
AGI-codeAT2G19560.1
Descriptionproteasome family protein
TAIR curator summaryencodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response.
Alias[AtTHP1][EER5][ESSP1][ENHANCED ETHYLENE RESPONSE 5][ectopic expression of seed storage proteins 1]
Gene coexpression
MR
MR Locus Description
9.84886 Ahg483634 Translation elongation factor EFG/EF2 protein
11.3137 Ahg490593
14.4568 Ahg940990 Protein kinase superfamily protein
14.9666 Ahg473379 GHMP kinase family protein
18.3303 Ahg487116 Transcription factor DP
18.9209 Ahg494356 ornithine-delta-aminotransferase
21.7025 Ahg347136 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
25.1992 Ahg929889 pre-mRNA-processing protein 40C
26.0768 Ahg927433 SUPPRESSOR OF AUXIN RESISTANCE 3
32.4037 Ahg474706 PHD finger protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression