Detail



ID : Ahg480566

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480566|fgenesh2_kg.3__3267__AT2G16880.1
Sequence
GGATGATCAT CAAATCAATT TCCACTGATT TCCAACAAAA ATGGCGACTT TGAAGCCACC CGAATCTCAA TTACTAAAAA CCCTAACATC AATCCTCACA TCAGAGAAAA CCCATTTGTT CGAAACCCTA AATCCCTACA TTCCTCAAAT CACACAGCCT CTCCTTTCCT CTCTCCTCTC TTCTCCTTCA CTCGCTAAGA AACCAGAAAC CCTAGTTTCT TTCTTCCAAT GGGCTCAATC TTCAATCCCC GAAGCATTTC CATCTGATTC ACCTCTTCCG CTTCTCTCCG TTGTCCGTTC TCTTCTCTCT CACCACAAAT TCGCCGACGC CAAGTCTCTT CTCGTCTCCT ACATTCGCAC CTCCGATGCA TCTCTCTCTC TTTGCAACTC TCTCCTTCAC CCGAATCTTC ATCTCTCGCC TCCACCTTCT AAAGCTCTCT TCGACATTGC TCTCAGTGCT TATCTTCATG CGGGAAAGCC TCACGTTGCG TTACAGATTT TCCAGAAGAT GATTCGATTA AAGCTCAAAC CAAATCTTCT CACTTGCAAC ACTCTTCTCA TTGGTTTAGT CAGGTACCCT TCTAGCTTCT CTATCGCGAG TGCTAGAGAA GTGTTTGATG ATATGGTTAA GGTTGGTGTT TCGCTTGATG TGAAAACTTT CAATGTTTTG GTTAATGGGT ATTGCTTAGA GGGCAAGCTT GAGGATGCTT TAGGAATGTT AGAGAGGATG GTTAGTGAAT TCAATGTTAA TCCTGATAAT GTTACTTACA ATACGATTTT GAAAGCGATG TCTAAGAAAG GGCGTTTGAG TGATGTTAAG GATTTGTTGT TAGATATGAA GAGGAATGGA TTGGTGCCAA ATAGGGTTAC TTACAATAAT TTAGTGTATG GTTACTGTAA GTTGGGTTCG TTGAAAGAAG CATTTCAGAT TGTGGAGCTG ATGAAGCAAA CTAATATATT GCCGGATCTT TGTACCTATA ACATGTTGAT CAACGGGCTT TGCAATGCGG GTAGTATTAG GGAAGGTCTT GAATTGATGG ATGCGATGAA GAGTTTGAAG TTACAGCCCG ATGTGGTTAC TTACAATACA TTGATTGATG GGTGTTTCGA ATTGGGGCTT AGTTTGGAGG CTAAGAAGTT AATGGAGCAA ATGGAAAATG ATGGAGTTAA ACCTAACCAA GTGACTCATA ATATATCTCT TAAGTGGCTT TGTAAGGAAG AGAAAAGGGA AGAGGTTACT AGAAAGGTTA AGGAATTGGT GGAAATGCAC GGGTTTTCTC CTGATATAGT AACCTATCAT ACTCTAATTA AAGCGTATTT GAAAGTAGGA GATTTGAGTG GTGCCCTTGA GATGATGCGT GAGATGGGGC AAAAAGGCAT TAAGATGAAT ACTATTACCC TTAATACCAT TCTTGATGCT CTATGTAAAG AGAGGAAAGT TGATGAGGCT CACAATTTGC TGAATAGTGC GCACAAACGA GGATATATTG TTGACGAGGT TAGTTATGGC ACATTAATCA TGGGATACTT CAGGGAAGAA AAAGTGGAGA AAGCTTTGGA GATGTGGGAT GAGATGAAGA GGATAAAGAT TACTCCTACC GTGACCACGT TCAACTCTTT AATTGGAGGT CTCTGTCACC ATGGAAAAAC TGAGCTAGCA ATGGAGAAAT TCGATGAGCT TGCTGAGAGT GGTTTACTTC CTGATGACTG TACTTTCAAT TCAATCATCC TTGGATACTG CAAAGAAGGA CGAGTTGAGA AAGCATTTGA GTTTTATAAT GAATCCATCA AACACTCTTT CAAGCCCGAT AACTATACAT GCAACATTCT TCTCAATGGT CTTTGTAAGG AGGGTATGAC AGAAAAGGCT CTCAATTTCT TCAATACGCT TATAACGGAG AGAGAGGTTG ATACAGTTAC ATACAACACG ATGATCTCGG CTTTCTGCAA GGACAGGAAG TTAAAAGAAG CATATGATCT TCTATCAGAA ATGGAGGAGA AAGGGCTAGA GCCTGATCGG TTTACATACA ACAGTATTAT CACTTCGCTT ATGGAAGATG GTAAGCTGAG TGAAGCAGAT GAATTGTTAA ATAAATTTTC TGGAAAATTT GGATCGATGA AGCAGAATTT ACAGGCAGAG ACAGAGAAAA ATCCAGCAAC AAGTGAATCA AAGGAGGAAC TTAACACTGA AGCTATTGCT TATTCAGATG TAATAAATGA ACTTTGTAGT AGAGGAAGAT TAAAGGAGCA TTCTACATCT TACACTGGGT GAAGGAGAGA CTTTTTTGTA TTTCGATTTT CTCAAAGCAT ACTTATTAGT TGTTACAGAA AGACATTTGA ATGTAGTTTT CATGTGATGA TGATGATTAT T 
Length2371
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20355783.. 20358165
Download Sequence
A.thaliana
AGI-codeAT2G16880.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg482474 Exostosin family protein
5.74456 Ahg478729 Transketolase family protein
8.94427 Ahg900511
21.9089 Ahg930907 Pentatricopeptide repeat (PPR) superfamily protein
33.8231 Ahg493637 phytochrome C
41.5692 Ahg926372 Domain of unknown function (DUF220)
44 Ahg939455
47.9062 Ahg482466 thioredoxin O1
49.295 Ahg340395
50 Ahg474924 regulatory protein (NPR1)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression