Detail



ID : Ahg930907

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930907|scaffold_303364.1
Sequence
CCGCCGCCGA TTTTCTCACG CCGTTATGAT TCGAACAACA TTCGCCACCG CCATCGCTCA TTTCCACACC CATTCTCATG GAGGAGCTCA AGCTCGTCCT ATACAGAACA ATACGCGAGA AAAAATCCAT TGTCCTGAAG CTTGGTTAGT CAAAATCGTA TCTACTTTGT TCGTCTACAG AGTTCCAGAT TCAGATCTCT GTTTCTGTTA CTTAAGCAAG AATCTGAATC CGTTTATCTC CTTTGAGGTT GTGAAGAAAT TGGATAATAA TCCTCACATA GGGTTTCGAT TTTGGGAGTT TAGTAGATTC AAATTGAATA TTCGTCATTC GTTTTGGACT TATAATTTGC TTACGAGATC GCTTTGTAAA GCCGGTATGC ACGATTTAGC GGGTCAGATG TTTGAGTGTA TGAAGAGCGA TGGGATTTCT CCGAATAGTC GGTTATTAGG GTTTTTGGTG TCTTCATTTG CTGAAAAGGG TAAGCTACAT TGTGCTACTG CATTGCTTCT ACAGTCTTAT GAGGTTGAAG GATGTTGTAT GGTGGTGAAT AGTTTGTTGA ATACGTTAGT GAAGTTGGAT CGTGTGGAAG ATGCGATGAA GCTTTTTGAG GAACATTTGA GATTTCAGTC TTGTAATGAT ACTAAGACCT TTAACATTTT GATTCGAGGT TTGTGTGGTG TGGGAAAAGC AGAGAAAGCG GTAGAGCTTT TGGGTGGGAT GAGTGGTTTT GGTTGTTTAC CTGACATTAT TACGTATAAT ACTCTTATTA AGGGGTTTTG CAAGAGTAAT GAGCTAAAGA AAGCAAATGA GATGTTTGAC GATGTTAAGT CGAGCAGTGT TTGCTCACCC GATGTTGTTA CGTATACGTC GATGATCTCA GGGTACTGCA AAGCTGGAAA GATGCAAGAA GCATCGGTTT TGTTAGATGA CATGCTTCGT TTGGGAATAT ACCCAACCAA TGTGACTTTT AATGTTCTCG TGGATGGTTA TGCGAAAGCT GGTGAGATGC ATACTGCTGA AGAAATTCGT GGGAAAATGA TTTCTTTTGG CTGTTTCCCA GACATTGTGA CCTTCACTTC CTTAATTGAT GGATACTGTA GAGTAGGACA AGTGAACCAA GGGTTTAGAC TTTGGGAAGA AATGAATGCC AGAGGAATGT TTCCTAATGC ATTTACCTAT TCTATTCTTA TCAATGCACT CTGTAAAGAG AATAGGCTTC TCAAGGCTCG TGAACTTTTG GGGCAGTTAG CTAGTAAGGA CATTATTCCA CAACCATTTA TGTACAACCC TGTAATTGAT GGGTTTTGTA AAGCTGGAAA GGTCAGTGAG GCAAATGTTA TCGTGGAAGA GATGGAGAAG AAGAAATGCA AACCAGATAA GATCACATTT ACGATTCTTA TAATTGGACA TTGCATGAAA GGAAGGATGT TTGAAGCAGT CAGCATTTTC CACAAAATGG TGGCAATAGG TTGTTCACCA GATAAAATTA CAGTGAGTTC TTTGTTATCT TGTCTTCTTA AGGCCGGTAT GGCTAAGGAG GCCTATCACC TAAACCAGAT AGCACATAAA GGCCAAATTA ATGATGGGGC ACCTCTAGAG ACGAAAACAG CAAATGTGAC TCTGGCTGCC TGCTAGACTT TCGATATAAT ATCTCT 
Length1656
Protein Sequence
Protein Residue
Map Locationscaffold_3: 13587975.. 13589630
Download Sequence
A.thaliana
AGI-codeAT2G06000.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.8149 Ahg891524 homolog of xeroderma pigmentosum complementation group B 1
21.9089 Ahg480566 Pentatricopeptide repeat (PPR) superfamily protein
25.8844 Ahg940314 peroxisome 1
33.0454 Ahg495207 RNI-like superfamily protein
35.1852 Ahg943674 transducin family protein / WD-40 repeat family protein
54.8635 Ahg925161 RNA-binding protein 1
61.3188 Ahg488602 Transducin/WD40 repeat-like superfamily protein
64.4826 Ahg329536 oxidoreductases
66.0908 Ahg475599 photosystem II reaction center protein G
72.0208 Ahg471462 cytochrome P450, family 71, subfamily B, polypeptide 29
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression