Detail



ID : Ahg480651

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480651|fgenesh2_kg.3__3352__AT2G17570.1
Sequence
CAGCTGAGAG CTGAGGATAC TGGAAGGAAT CTCAAATGGC TGAACTTCCA GGTCAAATAA GACGTATGAG CGGTGGAATT AGTCAATTGA TAGAGCAGAT ATACGGGTTT TCGAGAAGAT GTTTGTTTCG GGTCATATCT ATGGGTCCTA TACCTAGTCA TCTCGCCTTT ATCATGGATG GAAATAGGAG ATATGCAAAA AAGCACGGTC TAGAAGATGG GTCTGGTCAT CAAGCGGGGT TTTCTGCGCT TATGTCGATG CTGCAGTACT GCTACGAGCT AGGTATCAAG TATGTAACGA TATACGCATT TAGCATAGAT AATTTTAGAA GACAACCTGA GGAGGTTCAG TCTCTAATGG ATTTGATGTT GGAAAAGATA AAGTCTTTGC TTGAGAAAGA GAGTATCGTG CATCAGTATG GGATTCGGGT CTATTTTATT GGTAACTTGG CGCTTCTAAA TGACCAAGTG AGAGCTGCTG CCGAAAAAGT CATGAAGGCC ACAGCTAAGA ATAGTCGGGT AGTGCTTCTC ATCTGCATTG CCTATAACTC GACAAATGAG ATCGTACAAG CTGTCAAGAA ATCTTGTATT AACACGTCAG ACAATATGGA AGCATCTGGA AACTATAAAC ACGAGGATAG AGATAGTGAT ATAGAAGGAA CAGATATGGA GAACCAAGAG AAGAGGATAC AGTTGGTGGA TATTGAGGAG AATATGCAGA TGAGCGTGGC GCCGAATCCT GATATACTCA TCAGGAGTTC AGGAGAGACG AGGCTGAGCA ATTTTCTTTT ATGGCAAACA GGTAATACCC AGCTCTTCTC TCCGGCTGCT CTGTGGCCTG AGATTGGTCT GAGGCATCTG CTCTGGGCTG TATTGAACTT CCAAAGAAAT CATTCATACT TGGAGAAGAG GAAGAAACAA TTGTGATTGT CCTGAAGTGA AGGATATACA AAAGCTCTCT TTTCTTTTTG GCTTTGTAAT GTGATGTGAT GCTCTTGTGG GATTACATAG AACAAGCAAT GTATTTTACA CACGAACTCA TTTGAGTTTT TCTTTATGAA CCCTTAACCA AAAGTCCTCC CTAAAGACAT CTTACTTCCT GTTCTGTTCT TGTAAGATCC AGACTCTTTA AGATTTGTGT TTCACGAGTG TTTTC 
Length1155
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20908343.. 20909528
Download Sequence
A.thaliana
AGI-codeAT2G17570.1
DescriptionUndecaprenyl pyrophosphate synthetase family protein
TAIR curator summary
Alias[AtcPT1][cPT1][cis-prenyltransferase 1]
Gene coexpression
MR
MR Locus Description
37.0405 Ahg919779 branched-chain amino acid transaminase 2
49 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
53.3854 Ahg943129 Copper amine oxidase family protein
58.6345 Ahg344726
59.0424 Ahg924095 BTB/POZ domain-containing protein
60.1498 Ahg484153 SNARE associated Golgi protein family
61.3351 Ahg476817 PLATZ transcription factor family protein
62.6578 Ahg482001 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
89.2188 Ahg932721
89.4986 Ahg351609 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression