Detail



ID : Ahg480805

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480805|fgenesh2_kg.3__3506__AT2G16405.1
Sequence
AATTCAGAAC TTGAGACTGA TCAATTGATT GATTTTCACT CATCACTTTG CAACGATTTG ATCTACGAAA TGGAGGAGAA AACCGGATCA TCAGAGGTAG AGATCGTTGA GAAAGACGAA GCGAAGAAAC AATCAAAGGA TCCTGAGTTT ATAAGCTGTA TGATGCAGCC ATCAACAGCC GAATCAGATC CTCAGTACAT CGGAATCCGC CGGATTCTTC TTCATCGGAA AGCTGAATCT GGTGTTATCT CTCGCCGTTA TGATTGGAGA TGCAATGGAA AAGGATATGT TGCATATCGT AATTTCATTA GCAAACCTAG AAAATGGGAG AATCTGCGAA CGCCTAGTCT CTTAAGTAGT CCAGGAAACA GTGGTCGATG GTTACCGTCT CCGAGTCCTC TTTCCCATCA ATTTGAAGCT GAAAGCTTTA CTTCTAGTAG AGATTTACGG AGTGTTAATC AGGTTTCAAG CCATAGAGCG AGTTTTAGTT CAAGTTTGAG TGATGGTGAT AATTCATATC GTCGTGGTGG TGTTGAACAT GCTTATTCGT TTGTTGGAAT GCATTGCATC TTCGATCAAT GCAAATCTTC TGTTACTGTT CTCAAGTTTG GCCACATGAG TTCTGATTTA CTTGCATATG GAGCATCAGA TGGAAGCTTA ACAGTTTGTA GTCTCTTAGA AGAGCCTTCT GTCCTCAAGC AGTTGACAGG GCACTCAAAA GATGTCACAG ATTTTGACTT CTCGTCAAAC AATCAATACA TCGCGTCATC ATCACTTGAT AAGACAATAC GAGTATGGGA GTTGTCAAGA GGCGTTTGTA TTAGAGTTAT ATATGGAATC TCTCCACAGT TTTGTATCCG TTTCCACCCT GTTAATAACA ATTTCCTCTC TGCTGGCAAT GCAAACAAGG AACTCACGGT GTTCAATTTC AGCACTGGGA GAATTATTAA AAAACTGTTG TTCGAGGATG AGGTGACATC TATGGACCAT GATCACACTG GCCAAATAAT TTTCTGTGGA GATGGGCAGG GAACTATATA TTCAGTTAGC ATGGATTCGC ATACAGGTTC ATTATCCCGG TCTCATCGCC ATCGTACTAA TCATAAATCC CCTGTCACAA CTGTGAAGTA CCGAAGCTTC TCCCTCCTGG CATCAGGCCC TGTTCTGCTC ACATGTACTC AAGACGGAAA CTTGTGTTTC TTTAGTGTTG CTCTTCAGAT AAAAGGTTAT CTGACTTTGC GTTGCTCCCT CAAATTAGCC CCGCGAATAC ACAGAATCCA AGCATCGTTT TGCCCGCTAT TATCCCTAGA GAAAGGAGAA TACATAGTTG CTGGAAGCGA AGACTCGAAT GTCTACTTCT ATGATCTAAC CAAACCAAAG CACACATGTG TAAACAAGCT ACAGGGTCAC AGGTTTCCAG TAATGTGTGT TGCGTGGAAC CATGGTGAGA ACTTGTTGGC TTCGTCTGAT TTCTATGGTG TTGTCATTGT ATGGAAAAGA GCAAAGACAA GCTCATAAGG TTTGTCTATA ATATTATAAA TGAATCTAAA TCAGCCATTT TTGCCAGAAA GGCTTTTGGT TTTGCTTCAT CTCTGCGGTA TCGCTAATCT CAAACTGTGT CAATTTAGTT TC 
Length1632
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21974458.. 21977468
Download Sequence
A.thaliana
AGI-codeAT2G16405.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.38083 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
35.3553 Ahg936652 Protein kinase superfamily protein
39.598 Ahg920897 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
40.7431 Ahg475282 vacuolar protein sorting 34
41.3521 Ahg320449 regulatory particle non-ATPase 13
41.4246 Ahg951726 tRNAHis guanylyltransferase
42.7083 Ahg484217 mediator subunit 8
43.6348 Ahg930146 Zinc finger C-x8-C-x5-C-x3-H type family protein
46.7119 Ahg486329 citrate synthase 2
60.597 Ahg488728 plant glycogenin-like starch initiation protein 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression