Detail



ID : Ahg480911

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480911|fgenesh2_kg.3__3612__AT2G20750.1
Sequence
TCTCACTTCT CCACTTTTTT TTTGGTTTTT TTTTGGCTTG TCTCTCCGGT CAAAATGCAG CTCTTTCCGG TCATCCTACC GACACTATGC GTCTTCTTCC ACCTTCTAAG AGGCGGCTCT GGCTCTACTC CATCGTTGAC TCACTCCAGT CAACAAGTGG CAGTCACCCG TTGGCTTCCC GCAACTGCCA CCTGGTACGG AAGTCCCGAG GGCGACGGCA GCAGTGGAGG AGCTTGTGGT TACGGGTCAC TAGTGGACGT GAAGCCGTTT AAGGCAAGAG TTGGAGCGGT GAGTCCGATT CTGTTCAAGG GTGGTGAAGG CTGTGGTGCA TGTTACAAGG TCAGGTGTCT CGACAAGACC ATTTGCTCTA AGAGAGCAGT CACCATTATT GTCACCGACC AGTCACCGTC AGGACCATCT GCTAAAGCAA ACCACACTCA CTTCGACCTT AGCGGTGCCG CCTTTGGACA TATGGCTATT CCCGGCCATA ACGGTGTCAT CCGCAACCGT GGCCTATTAA ACATCCTCTA CGGCCGAACG GCATGCAAAT ACAAAGGGAA GAACATAGCC TTCCATGTGA ATGCAGGATC AACAGATTAT TGGTTATCTC TTCTCATTGA GTATGAAGAC GGTGAAGGAG ACATTGGCTC TATGCACATT CGTCAAGCGG GGTCTAAGGA GTGGATAGCA ATGAAGCACA TATGGGGAGC AAACTGGTGC ATTGTCGAAG GACCACTCAA GGGACCATTC TCTGTGAAGC TTACAACTTT GTCCAACAAC AAGACACTCT CTGCCGCCGA CGTCATCCCC AGTAACTGGG TTCCCAAAGC TACTTACACC TCCCGCCTCA ACTTCTCCCC TGTTCTCTAA TTAACCACTC TTCGTTTTTT TTTGTTGTGG GAGAGAGTAA CACAGAGAGG ACAATGAGTG AGCCATCTCC AAAGTTAGGG GAAGAAGAGC TTGCAATGTG TGTGTGACTA CTAACTTTTT ATGTTGTCCA TTTTCATTTT TTTTCCTTGT CCATAGGGAT GTGTGTATCA ATCATCTATA ATCTTGTTTG TGGGACATTA CTATATATAA GAAGAGAATT TACAAAAGAT GTAATAATGT GCAAAATCTC ATTCCTTTTT TC 
Length1132
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22654411.. 22655978
Download Sequence
A.thaliana
AGI-codeAT2G20750.1
Descriptionexpansin B1
TAIR curator summarymember of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXPB1][ATHEXP BETA 1.5][EXPB1][expansin B1]
Gene coexpression
MR
MR Locus Description
6.08276 Ahg945123 Putative membrane lipoprotein
10.0995 Ahg471298 cytochrome P450, family 77, subfamily B, polypeptide 1
14.6969 Ahg323748 serine carboxypeptidase-like 36
16.5227 Ahg945124 glycine-rich protein
16.8523 Ahg482818 glycerol-3-phosphate acyltransferase 6
20.199 Ahg471186 Pectin lyase-like superfamily protein
22.1359 Ahg351411 HXXXD-type acyl-transferase family protein
22.6495 Ahg477690 Li-tolerant lipase 1
23.2809 Ahg949931 O-acyltransferase (WSD1-like) family protein
24.9199 Ahg478003
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression