Detail



ID : Ahg480913

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480913|fgenesh2_kg.3__3614__AT2G20770.1
Sequence
CGTTTAGTCC TTCTTCTAGA AAGAGACAAC AATGGCGGAT CGGTTCTTCG ATAACGTGAT GCCTGATTTC GTGAAGGAGA AGGAAAGTGA ATCTGGAGGA GATTCGCTTA GGAATCTGCT CGCTATGCCG TATTCGTCTC TCTCGCAGCA GCTCAAACGA TCCGCTTTGG ATCTCAAGGA AACTGTAGTG ATGGAAACTT GGGGTTTTAG TGGGCAGACT GTTGAAGACT TCAGTCTTTA CTCTGGAACT CTTGGAGCTG CGTTTTTACT CTTTAGAGCT TATCAGGTTA CTGGAAACGC CAATGATCTT TCCCTTTGCT TGGAAATCGT CAAAGCTTGT GATGCTGCTT CTGCTTCCTC AGGGGATGTT ACTTTTCTCT GTGGCCGAGC TGGTGTTTGT GGTCTTGGCG CCGCTGCAGC TAAGCTTTCT GGTGAGGAGG AGTTGCTCAA TTACTATTTG GCGCAATTTC GTCTGATAAG ACTATCTAGT GATCTTCCTA ACGAGCTTTT GTATGGAAGA GTTGGTTATC TATGGGCTTG TTTGTTCATC AACAAGTACA TTGGCAAAGA AACTTTGTCT TCAGATACCA TTCGCGAAGT TGCTCAGGAG ATTATCAAGG ACGGAAGATC AATGGCTAAG AAAGGAAGCT CACCGCTTAT GTTTGAATGG TATGGCAAAC GGTACTGGGG TGCAGCACAT GGGCTTGCTG GTATTATGCA CGTATTGATG GATGTTCAGC TGAAGCCTGA CGAGGCAGAG GATGTGAAGG GAACCCTTAA GTATATGATC AAGAATCGGT TTCCAAGTGG AAATTACCCT GCTAGTGAAG AGGATAGGAA GAAAGATGTC CTTGTGCATT GGTGTCATGG AGCTCCTGGG ATTGCTCTCA CACTTGTGAA AGCTGCTGAG GTTTTTGGGG AGAGAGAGTT TCTGGAAGCG GGTGCAGCTG CAGCAGAGGT GGTTTGGAAC CGTGGATTGC TCAAGCGGGT GGGGATCTGT CATGGAATAA GTGGGAATGC ATATGTTTTT CTCTCGCTTT ACAGAGCTAC GGGAATGAGT GAGTATCTGT ACCGTGCAAA AGCCTTTGCC AGTTTTCTGC TTGATAGAGG CCCCAAGTTA CTCTCAAAAG GAGAAATGCA TGGAGGTGAT AGTCCTTATT CCTTGTTTGA AGGCTTTGCA GGCATGGCCT ATCTCTACCT TGACATGTTC GACCCATCTC AAGCCAGGTT CCCAGGTTAC GAGCTTTAAA CTTCTAGATC GATAACAATC TCCATACTTT TGTCCATCAA ATCCTTATCT CTTGTTATGG AGGAGGCACA AGGTAAGAGA GGGTGTGTGT ATGTGTGTGT TTACTACTAG CAAAATCTTG TTGTTGTTGT TTGATGGTGA ATCAGTTTGA GTTGATATCT ATTGGAACTG TCCGGAGAGC CTGTAACTTT ATGATGTTAG AAGGAACACA AAGGTTCTGT CCTTTCTGTA T 
Length1481
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22658551.. 22660433
Download Sequence
A.thaliana
AGI-codeAT2G20770.1
DescriptionGCR2-like 2
TAIR curator summaryEncodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.
Alias[GCL2][GCR2-like 2]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg487926 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
10.5357 Ahg935883 RNI-like superfamily protein
11.4891 Ahg482124 glucan synthase-like 3
13.3041 Ahg945284 GPCR-type G protein 1
14.3527 Ahg905615 Acyl-CoA N-acyltransferases (NAT) superfamily protein
14.9666 Ahg472438 Galactose oxidase/kelch repeat superfamily protein
15.9687 Ahg488046 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
19.8997 Ahg937589 protein-l-isoaspartate methyltransferase 1
30.5123 Ahg492153 FKBP-like peptidyl-prolyl cis-trans isomerase family protein
38.3014 Ahg890876 conserved peptide upstream open reading frame 60
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression