Detail



ID : Ahg481060

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481060|fgenesh2_kg.4__120__AT2G21950.1
Sequence
ATGGCGGCTA CAACGAGCTC CGGCGACGAC CCACCGGAAA CGAAATCGCC GGCGCAATTG ATTCCATTAT TATCAGACGA CGTTGCTCTG AATTGCCTTG CTCGCGTCTC AAGATGTCAC CATCCGATCC TCTCTCTCGT CTCCAAGACT TTCCGATCTC TGCCAACATC GCCTTTGCTC TACGCCACGA GATCTCTCGT CGGCGCCACT GAAAACATCC TCTACGTCGC AATTCGTTTA CCTCCTGAAT CTGGTGCGTG TTGGTTCACT CTTCTCCATC GAACCTTATC AAGCTCAACG AATTCGAAAA TGCTTGTTCC AATCCCGTCT TGTCCTTCAC CGTCTCTTGT TGGATCTGCT TACGTTGTGG TAGATTCAGA TATTTACGTG ATCGGTGGAT CTATCAGAGA CGTACCTTCT TCGAGCGTGT GGGTTCTCGA TTGCAGATTT CATACTTGGC GACGAGTCTC TAATATGAGA GTAGGTCGTG AATTTGCAGC AGCTGGTGTA ATCGATGGGA AGATTTATGT GATTGGAGGA TGTGTGGTTG ATAATTGGGC TCGATCGATT AATTGGGCAG AGATGTTTGA TATAAAGACT CAAACTTGGG AGCCAGTGGC TAGTCCAGGT ATGGAGGTGC GTGAGAAATG GATGCACGCA AGTGCGGTTA TGGAAGGGAA GGTTTACGCA ATGGCTGATC GAAATGGTGT TGTTTACGAG CCCAAGGAAA AGAAATGGGA TATGCCTGAG AAGAGGCTTG ATTTGGGATG GAGAGGAAGA GCTTGTGTGA TTGACAACAT ATTGTATTGT TATGATTACT TGGGGAAGAT TAGAGGGTAT GATCCAAAAG AGAGGATTTG GAGAGAGCTT AAAGGTGTGG ATTCACTTCC TAAGTTTCTT TGTGGGGCTA CAATGGCGAA TCGTGGTGGA AAGCTTGCGG TTTTGTGGGA AGGTAAAGCT GGTAGTGGCG GTTCGAGGAG AATGGAGATT TGGTGTGCGG AGATTGATGT TGAAAGGCGT GGAGAAGGGG AGATTTGGGG GAAGATCGTG TGGTCTGGTA CCGTGCTTAC GGTTCCTAAT GAATCCGCCA TTGTGAATTG CTTGGCAGCT ACAGTTTGAT GGTGATTCAT CATCCATGCA TAGTGATTTA GACGGTGTTA CCAGAAATGG TGGATCGACA AAGGGTATAG CTTGGCCTGA GGCCCTGAGC CGAGATGAAA CAATAGATTT GCTTCTGTAC CTTTTGAG 
Length1248
Protein Sequence
Protein Residue
Map Locationscaffold_4: 585177.. 586524
Download Sequence
A.thaliana
AGI-codeAT2G21950.1
DescriptionSKP1 interacting partner 6
TAIR curator summaryEncodes an SKP1 interacting partner (SKIP6).
Alias[SKIP6][SKP1 interacting partner 6]
Gene coexpression
MR
MR Locus Description
11.4018 Ahg493618 O-fucosyltransferase family protein
18.8414 Ahg941854 prefoldin 5
19.0526 Ahg480978 Basic-leucine zipper (bZIP) transcription factor family protein
23.2809 Ahg315447 ILITYHIA
23.9583 Ahg345894 Protein kinase superfamily protein
28.2843 Ahg495363
29.4958 Ahg493662 Protein phosphatase 2C family protein
30.7409 Ahg910830 Protein of unknown function (DUF3755)
30.8869 Ahg920156 Transducin/WD40 repeat-like superfamily protein
36.606 Ahg895886 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression