Detail



ID : Ahg481070

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481070|fgenesh2_kg.4__130__AT2G22070.1
Sequence
ATGGATGCTC CGGTTCCACT CTCTTTATCT ACTCTATTGG AACTCTGCAC CAATCTCTTG CAAAAATCTG TAAACAAGTC CAATGGTCGT TTCACAGCGC AATTGGTCCA TTGTCGCGTT ATCAAATCAG GTCTTGTGTT CAGCGTTTAT CTGATGAATA ATCTAATGAA TGTCTACTCA AAGACTGGTT ATGCTCTTCA CGCACGCAAG TTGTTCGATG AAATGCCTCT GAGAACGGCT TTTTCATGGA ACACGGTTCT CTCGGCTTAT GCTAAACGAG GAGATATGGA TTCGTCTTGT GAATTTTTTG ATCGGTTGCC TCAGAGGGAT TCGGTTTCGT GGACTACGAT GATTGTTGGG TATAAGAAAA TTGGTCAATA TCAAAAGGCT ATAAGAATTA TGGGGGAAAT GATGAGAGAA GGGATTGAGC CGACGCAGTT TACTCTTACG AATGTGCTTG CATCGGTGGC TGCAACTCGG TGTTTGGAGA CAGGTAAAAA GGTTCATTCT TTCATCGTTA AGCTTGGTCT TCGTGGTAAC GTTTCTGTGT CGAATTCCCT GCTTAATATG TATGCAAAAT GTGGTGATCC GATGATGGCA AAAGTTGTTT TTGATAGAAT GGTGGTTAAA GATATCTCAA GCTGGAATGC TATGATTGCG TTACATATGC AGGTTGGTCA GATGGATCTA GCTATGGCGC AATTCGAGCA AATGGCTGAG CGCGATAAAG TCACTTGGAA TTCTATGATT TCTGGTTACA ATCAGAGAGG GTATGATCTC AGAGCTCTAG ATATGTTTTC GAAGATGCTG AGGGATTCTA TGTTGTCACC AGATAGATTC ACTTTGGCGA GTGTGTTATC TGCTTGTGCC AATCTTGAGA AGCTTTGTAT TGGGGAGCAG ATTCATTCAC ATATTGTTAC TACAGGGTTT GATATTTCCG GAATTGTGTT AAACGCCCTG ATCTCAATGT ATTCGAGGTG TGGAGGGGTC GAGACTGCCC GAAGACTGAT AGAACAAAGA GGAACCAAAG ATCTCAAGAT CGAAGGTTTT ACAGCTTTAC TTGATGGCTA CATTAAGCTT GGGGATATGA ACGAAGCTAA GAATATATTT GATTCGTTGA AAGATCGCGA TGTAGTCGCA TGGACCGCCA TGATTGTAGG ATACGAGCAA CACGGTTTGT ATGGTGAAGC TATAAACCTT TTCAGATCAA TGGTTGGAGA AGAGCAGAGA CCAAATAGTT ATACTCTTGC AGCAATGTTA AGTGTAGCTT CAAGTTTGGC ATCATTGGGC CATGGCAAGC AAATCCATGG GAGTGCTGTA AAGTCAGGGG AAATTTATTC GGTTTCTGTC AGCAACGCGT TGATAACAAT GTATGCAAAG GCGGGTAACA TTACATCGGC AAGCCGGGCA TTTGATTTGA TACGCTGTGA GAGGGATACA GTATCTTGGA CGTCCATGAT TATTGCGTTG GCACAGCACG GTCACGCAGA AGAAGCACTT GAACTCTTTG AGACAATGCT GATGGAAGGA CTGAGACCTG ATCACATAAC ATATGTTGGT GTTTTCTCTG CCTGTACTCA TGCCGGTTTG GTCAACCAAG GTCGTCAATA CTTCGATATG ATGAAGGACG TTGATAAGAT TATACCTACC CTTAGCCACT ATGCTTGTAT GGTAGACCTG TTTGGACGTG CTGGTTTATT GCAGGAAGCA CAAGAGTTCA TCGAAAAGAT GCCTATTGAG CCTGATGTAG TGACATGGGG TTCACTGCTT TCTGCTTGCA GGGTTTACAA GAACATCGAT CTTGGGAAAG TTGCAGCAGA GAGATTGCTT CTTCTCGAGC CAGAGAACAG CGGGGCATAC TCAGCCTTGG CTAACTTATA CTCAGCTTGT GGAAAATGGG AAGAAGCTGC TAAGATAAGA AAATGCATGA AAGATGGAAG AGTGAAGAAG GAACAAGGGT TTAGCTGGAT TGAAGTGAAG CATAAAGTCC ATGCCTTTGG AGTTGAAGAC GGGATTCATC CCCAGAAGAA CGAGATATAC ATAACAATGA AGAAGATTTG GGACGAGATA AAGAAAATGG GATATGTTCC CGACACTGCT TCTGTACTAC ACGACCTCGA AGAAGAGGTT AAAGAACAAA TTCTAAGGCA CCACAGCGAG AAACTAGCAA TAGCATTTGG GTTAATTAGC ACTCCGGATA AAACCACATT AAGGATCATG AAGAATCTCA GAGTGTGCAA TGATTGCCAT ACGGCTATAA AGTTTATCTC CAAGCTTGTG GGAAGGGAAA TAATAGTGAG AGATACAACA AGATTTCACC ATTTCAAAGA TGGGTTTTGT TCTTGCCGAG ATTATTGGTG ACTAACTCAA GCCATTGTAC AAACAGATTC AGGTATGGCT TCTTTGGAGG GAAACCAACA AAAGTTTTC 
Length2429
Protein Sequence
Protein Residue
Map Locationscaffold_4: 610383.. 612832
Download Sequence
A.thaliana
AGI-codeAT2G22070.1
Descriptionpentatricopeptide (PPR) repeat-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
28.4956 Ahg475725 Subtilase family protein
29.5466 Ahg351609 Protein of Unknown Function (DUF239)
48.5901 Ahg316947 Pectin lyase-like superfamily protein
50.2494 Ahg943595 copper ion binding;electron carriers
55.3263 Ahg475522 Ubiquitin carboxyl-terminal hydrolase-related protein
57.931 Ahg494865 Pectin lyase-like superfamily protein
60.2578 Ahg481963 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
64.5755 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
68.8912 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
75.2064 Ahg479634 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression