Detail



ID : Ahg481416

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481416|fgenesh2_kg.4__476__AT2G25640.1
Sequence
AAGTTCCATT TAGGGTTTTC TTCTTCACTA TACACTCATG GTCTTCTCTT TCCAATCGCC GCCTCTGATC TCTCTTCCTC GCTTCTCAGA TTAGGTAATT CTTTGTTTTG TTACATTGAT TTGCCTGTTA TGTCCAACAA TCTCTCGCCT CAGCATTGTT TACAAATGGG TCAATTCATC AATGTTGACA CTACTCCAGA CCTGACTTCT AATCAGATCT CTGGTGGGAG GCAGGATTTT CATGTAATGT TGCCTACTGC TGTTGGTTTA GGATCAGTTA ATATGGATAC AAATCTGTTA CCCGGTAAGC GGAAATCTCC GTTGCAGCAA TCTGTGCCAA ATAAACGGAT GGTACTACCT ATGGAACATA GACCATGGGT GTCTGCTCCA ATGCAGGTGC AGTTATCTTC TGTTTCCCCC AGAACACAGT ATTTGCCTGC ATCATTTGTT AGTAAGAATA GTTCTGTTTC TTGTAATAAA CCCGGTAAGC AAACTGCGGC GAGAAAACAG ACTTCGCAGA AACCGATGTT GCTGAAACCT CAGAGTGAAT CATCTGGATC TGTTAGGTTT AAAATGAGAG AATCTTTAGC TGGTGCATTG GCAATGGTAC AGTGTGATAT GGAAGTTCCT AAAGAGTCGA AAAGGTTAGA TAGTGAGACT GTAGCTAATC CTCTCGAAGG TCATGTTAGT GAGCCAGTGT CAGCTGCTTC TGGAGTTGAT GTGATGGTAT CTAATGGGAG CACAGAGATT CTGACCCTCA GTGATCCTAG TACTTTAGAA GGTGTCTCTG TTCAGACTGT GTTACCGGAG ATTTTGACTA TCACCAAGAC AACTGATGCC CAAGAAATTA TTGCACAAGA ACCTGAGGCT TTAAAACCGT TTGTGCAAGA CAATGTTTCA TATAGTGACA ATGTGTTTTC AAAAGATGAT CTTTTGCAAG GGAATGACCT CTCTTGGGCT CTTGAGTCGG ATATTGATTT TACTGTCAAT TGTCAAAATG ATATGATTGG AGCAATGGCT AATGATGGGA GTCAGGAGAA ATTGTTAATG GATCCACAAG TTTTGGCATT TGAAATAGAG GCAGAACTGT TTAAGTTATT TGGTGGTGTG AATAAGAAAT ATAAAGAGAA AGGAAGGTCT CTCTTGTTCA ATTTGAAAGA CAAGAGTAAT CCTAAACTCA GGGAAAAGGT TATGTATGGA GAAATTGCAG CAGAGCGATT GTGTTCCATG TCAGCAGAAG AACTTGCTTC AAAGGAACTA GCTGAGTGGC GACAAGCAAA AGCAGAAGAG ATGGCTCAGA TGGTTGTTCT GCAGGACACA GAGGTGGATA TCAGAAGCCT AGTAAGGAAA ACACACAAAG GAGAGTTCCA AGTGGAAGTT GAACCAATGG ATAGTGGCTC AGTAGAGGTC TCTGTTGGAA TGAGTTCGCT TAATTGGTCT CGACCAAAGA ATATCAAGAA GAAAACCCCT TCCATTACTA AAACACTTGG AATCAAGAAG GAATTGAATG TCTCTGATGA GGGCGATGGC GCAATAAATG GAGTCACAAT AGATGATGAG ATGCAGGCTG CCACTGTATC TCTTCCTCCA ATTGTCTCTC TTGATGAATT CATGTCATCC ATAGATTCTG AATCTCCGTC TGTGTCAGAT AATAATGATG CAGAGGCGGT TTTAGTTTGT ATATCACCCA AAGAAAGTGC TAATATTGAT CTTGGTACAT CACCAGTTAA GGCTGAGGAT GGTGACATAG TATCGTTAAA GCCTGATTCT GATTTGAAAT CTGAAATTAT ATCTGGTTTC ATACCTGATG GTGAACGCGT ATGGGAAGGT GCGCTCCAGC TGAGTGCTTC TACTGTGAGC TCTGTCATCG GCATTCTAAG AAGTGGCGAA AAGACTACTA CTAAAGAGTG GCCTATGTTG CTTGAGATCA AGGGTAGAGT CAGATTAGAT GCATTTGAGA AATTTGTTCG AGAGCTCCCA AATTCCAGGA GCCGTGCTGT TATGGTTATG ACTTTCGTCT GTAGAGAAGA GTGCTCAAAG ACAGACCAAG AGATCATTTC CGAGGTGGTG GATTCGTACG CTAAAGATGA GAGGGTGGGT TACGCAGAAC CGGCTTCAGG AGTTGAGCTA TACCTATGCC CAACCCGTGG GAGAACCGCA GAGATTCTAA ACAAGATTGT TCCGAGAAAC CAACTCGATT TCTTGAAATC TTTAAATGAT GATGGTCTTA TAGGTGTTGT T 
Length2241
Protein Sequence
Protein Residue
Map Locationscaffold_4: 4314526.. 4317639
Download Sequence
A.thaliana
AGI-codeAT2G25640.1
DescriptionSPOC domain / Transcription elongation factor S-II protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
34.7707 Ahg936082 expansin A15
38.0132 Ahg472972 ADPGLC-PPase large subunit
51.4684 Ahg926613 Lung seven transmembrane receptor family protein
55.5338 Ahg487399 Transducin/WD40 repeat-like superfamily protein
62.498 Ahg491790 polyamine oxidase 5
64.8074 Ahg485369 PTEN 3
67.3944 Ahg346338 Leucine-rich repeat protein kinase family protein
87.3384 Ahg479268 receptor-like kinase 902
88.3176 Ahg484101 CHASE domain containing histidine kinase protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression