Detail



ID : Ahg481579

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481579|fgenesh2_kg.4__639__AT2G26990.1
Sequence
TCTTCTTCTT CTACTTCCGC AAAAACCCTT TGCATAAAAA GAAGCAAAAT TCTCTCATCG TTCTTACTTT GCCCTAATTC ACGAATCGTT TGTTCTTCTT CTTCCTCTGA TCGTCATGGC TTCAGATGCT GATATGGAGG ACTATGGATT CGAGTATTCT GATGAGGACC AAGAGGAACA AGATGTTGAC ATTGAGAACC AGTATTATAA CTCTAAAGGT ATGGTTGAGA CTGAACCTGA AGAAGCACTT TCTGGGTTTG CTGAGGTTGT TCAGATGGAG CCAGACAAAG CTGACTGGGG TTTCAAAGCT CTTAAGCAGA CTGTGAAGAT CTATTATCGT CTAGGTAAAT ACAAAGAAAT GATGGAAGCA TATAGAGAGA TGCTTACATA TATCAAGTCA GCAGTGACCA GGAATTACAG CGAAAAATGT ATAAACAATA TTATGGATTT CGTCTCTGGA TCTGCTAGCC AGAATACTGG CCTGCTGCAA GAGTTTTATC AGACCACTTT GAAAGCCCTT GAAGAGGCTA AGAATGAGAG ACTCTGGTTC AAGACGAATC TTAAACTCTG CAACATCTGG TTTGACATTG GTGAATACAG ACGTATGACC AAGATTCTTA AGGAACCCCA TAAATCTTGT CAAAAGGAAG ATGGAACTGA TGATCAGAAG AAAGGAAGTC AGCTGCTTGA GGTTTATGCA ATTGAAATTC AGATTTACAC TGAAACGAAG GACAACAAAA AGCTTAAGCA ACTATACCAT AAGGCACTTT CCATCAAATC TGCCATACCT CATCCTAGGA TCATGGGTAT AATCCGCGAG TGTGGTGGAA AAATGCACAT GGCAGAACGT CAGTGGGCAG AAGCAGCGAC AGACTTCTTT GAGGCTTTTA AAAATTACGA TGAAGCTGGC AACCAAAGAC GTATACAGTG CCTGAAATAT CTTGTTCTCG CGAATATGCT GATGGAGTCG GAAGTGAATC CATTTGATGG CCAAGAGGCA AAGCCGTACA AAAACGACCC TGAGATCTTG GCAATGACAA ATTTGATCGC AGCATATCAA CGAAATGAGA TCATAGAGTT TGAGAGAATT CTAAAGAGTA ACCGGAGGAC GATAATGGAT GATCCATTCA TCAGAAACTA CATGGAAGAT CTGCTGAGGA AAGTGAGAAC ACAAGTGTTG CTGAAGCTGA TAAAGCCATA CACAAAGATA GGGATTCCGT TCATATCAAA GGAACTGAAC GTGCCAGAGA AGGACGTGAC GGAGTTGCTA GTGTCACTGA TACTCGACAG CCGAATCGAT GGTCACATTG ACGAAATGAA CCGTTACTTG CTAAGAGGTG ACAGTGGCAA TGGAAGGAAG CTGCATAAAG CGGTTGATAA ATGGAACACA CAGCTCAAGT CTCTTTCTTC AAACATCACC AGCCGAGTCT GTTAATCTTT TGGATAGATT TTGTGTTTTG GCGTTGATTC TCTGTGGATT ATCTGTTTCT CTTCACATAG CTGGATTTGA TTGAGTTGAT AAACCACTTC AATGCCAAAA AAAAGGATTT GAAAATTTCT GAATTCTCGT TTTTAAAATT GATTTCTTTA CTTTG 
Length1595
Protein Sequence
Protein Residue
Map Locationscaffold_4: 10212391.. 10215457
Download Sequence
A.thaliana
AGI-codeAT2G26990.1
Descriptionproteasome family protein
TAIR curator summaryRepresses photomorphogenesis and induces skotomorphogenesis in the dark.
Alias[ATCSN2][COP12][CSN2][FUS12][CONSTITUTIVE PHOTOMORPHOGENIC 12][FUSCA 12]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg484955 Nucleotidyltransferase family protein
4 Ahg942039 basic leucine zipper 9
4.3589 Ahg482437 myosin heavy chain-related
5.19615 Ahg475499 ARM repeat superfamily protein
11.5326 Ahg472456 Endoplasmic reticulum vesicle transporter protein
13.1909 Ahg485239
16.7332 Ahg932042 ER lumen protein retaining receptor family protein
19.2354 Ahg483096 Staphylococcal nuclease homologue
19.5959 Ahg493270 associated molecule with the SH3 domain of STAM 3
27.9285 Ahg488386 U-box domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression