Detail



ID : Ahg481716

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481716|fgenesh2_kg.4__776__AT2G27900.2
Sequence
ACACACACCA TTGTCGAAAC AAATCAAAAG ACTCAACAAA AGTCTCCTTC TTCTAGATCT CTTCCCGATC CGATTTGTGA CTCGCCGGAA AATAAAAAAC ACAGACATTT TCTCCGATCG TGAAATTGGA TGGATCAATT ATTGATCTTA CTGGTATAAA GAAGAGATGA GAGATGCAGC CAAATCTCTT CCCATTCGGT TCAGTTTTGG GTAATCCATT TCTCTTCAAT GGCGGTGGAG ATCTAAACGA ACTTGGTTCT GGTGCTGGAT TCGAAAGCTC TAGGGTTTTC TTCTTACTTC CTTTCTTATT ATCCCAAGGC ACTGGTGTCA TGGATTTATC TAAAGTTGGT GAAAAATTCC TCAGCTCTGT AAAATCCGCT ACTTCTCTTG GTCTCTTACC TTCACCTTCT ATCTCTGATC GTCCTGAGAT TCCGGCACGT GCTGCGGCAG CTGCTGCGGT TGCTCGTGCT TTGGCGGGAC TTCCTTCTGA TCAGAGGTTG AGTATATCTT CTACTGCTAC TGAGCTTAAC TCAATTTATG GAAATAGACC TCTTCCTCAA CAAGTTGAAG AGCTTGAAGA GGGATTTTAT GAAGAGGATT TTGATCCGGT AAGGCATATT TTGGAGAATG TGCCGGAAGA TGAAAGTGAG TTAGCTTATT TTGAGAAGCA GGCTACCTTG AGGTTGGTAC AGCTGGATAG AGTGGCGGAA AATCTGTCAC ACCATGTTAT GGAGCATCAT GAAGTAATGG TGAAGGGGAT GAATTTGGTA AGAGAATTGG AAAAAGATTT GAAGATTGCA AATGTCATCT GCAAGAATGG AAGACGAAAT TTGACCTCTT CTATGAATGA GGCTTCAAGA GATCTTATTG TACACACTCA TTCCAAAAAG AAACAAGCTC TTCTGGATAT GCTTCCTATA CTAACTGACC TCCGCCATGC AAGAGTAATG CAGTCAACTC TTGAAGACCT TGTTGAAGAA GGAAACTATT GCAAGGCATT TCAAGTTCTA TCTGAGTATT TGCAGCTGCT TGACAGTCTA TCTGAGTTCT CAGCAGCCCA AGAGATGACC CGTGGTGTTG AGGTTTGGTT AGGAAGAACT CTTCATAAGC TGGATTCACT TTTGTTGGGC GTTTGCCAGG AATTCAAAGA AGATAGTTAT GTAATGGTCC TCGACGCTTA TGCACTGATC GGTGATGTCT CTGGTCTCGC AGAAAAGATA CAAAGCTTCT TTATGCAGGA AGTTATCTCA GAAACCCACT CAGTGCTAAA GAGCATTGTT GGGGAGGATA ACAGTGCTGC CACCCAATAT AGTAGACTTA CCTACAGCGA TCTATGCCTT CAGACACCAG AATCCAAGTT TAGGCAATGT CTTTTGAGAA CACTAGCTGT GCTCTTTCAG TTAATATATT CATACCATGA GATAATGAGT TTCACGCCAG AAAAGAAGGT AGAAAGTTTG ATCTCACCAA GTCCTGCAAC AACTCAAAAG GTTGATTCAG TGACCGAAAG TTCATGCAAC CCACAGGATG GTGGTCTCTT TTCAGGAAGC ATACCTCCTT GTACCATTTC TGCTGAAGAG TCTGATGGAA GTGGAACATC CAGTTCAGTG CAACATGCGT CTGATATTGC AATAGATGAG TCTAGGAATT CTGGAGATAC AGTATCAAGT AGCGAGTCGC CATGGTACTA TCTACGAAAA GAAAGTGCAG CTTTTGTTTC AGAAACTCTT CAGAGAGGAC GCAGAAATCT TTGGCAACTT ACAACAAGTC GTGTGTCAGT TTTGCTCTCT TCCCCAGGTG CTTCTTCGAC AAGTATACAT CAGTTCCTAA AAAATTATGA AGACCTGAGC ATCTTTATCC TTGCTGGGGA AGCTTTCTGT GGATTTGAAG TTGTTGATTT TAGGGAGAAG CTAAAGGGTG TATGCGAAAA TTATTTCACT GCATTTCATA GGCAAAGCAT GCATGCGCTT AAAATGGTCC TGGAGAAGGA GACATGGACG AAACTGTCAC CAGATACTGT GCAAGCTATT AATTTTGCTG GTCTTGTGGG GGATGGGGCT CCCCTAATTA TTTCTTCCCG CAGTGCCTCG GGTTCTTCCA GATTCCCTCA CTCTAATAAG TCAAATGACT CAATTGATCC AAGTGGCAAC AGGAGTGGAT TTTCATATTG GCTGAAAAGT GGAAACCCCT TCTCAGCAAA GTTAACTCAC TATAGAGAAG ATCAAGACTA CTCCTCGGTC AATGGAGGAG ATCATGAAGG TAATGATAGT ATTCACGATG ATGTTGTGAA TCCCAAGATA ACAGACAAAA ACCACATCAA CGGAGGTAGT CCTGTTTCTG AAGATGAAAA CGAAGACCTT CTTGCTGACT TTATTGATGA GGATAGTCAG CTTCCAAGAC GAAGTTTTAC ACGTAGTCAA TCAAGGAGTT CTTCTTCATA TTTCAATACT AATGATGATT TGACAGCTCA AACAGGATCG TCCCTTTGTC TTCTAAGATC CATGGATAAG TACGCGAGGC TTATGCAGAA ACTAGAAATT GTTAATGTTG AATTCTTTAA GGGAATATGC CAATTGTTTG GGGTCTTTTT CTATTTCGTT TTTCAAGTAT TTGGTCAAGA AAATACTAAT TCAGGTGGAA AAGGAGTTGC CGACTCTTTC AATCCTCGTT TGAAAAGCTG CTTATCCCGG ATATCACAAG AGTGTGAGCA ATGGATAAAA CCTCACCTTT CATCATCACC ATCTTCTTCA CTTGCCTTTC CCAACACAGT TAGTCTTGCG GATGTGACTC CAGCAAGTCC CTTAAATACT TCTGGTCACT TATCAGGCGT ATCTTTTAGT CTCAAGGAAA GATGTGCTGC TGTGGACACA GTATCTCTTG TGGCTCGGGT ATTGCATAAA TCAAAGGCTC ATCTCCAATC AATGTTAATG TCAAGAAATG GCTCTCTGGT TGAAGACTTC TTTGATCAAC TGGTTGGTTC CGTACCTGAT CTGACAAAGC ACTTACATAG GACAACTGCG AGGATACTGC TGCATGTTAA TGGATATGTT GACCGGATAG CTAATTCTAA ATGGGAAATC AAGGAGCTTG GAATGGAGCA TAATGGGTAT GTTGATCTGA TGCTCGGGGA ATTCAAACAC TACAAAACAA GGCTTGCTCA TGGAGGCATT CCACAGAAGG TCCAAAACCG CCTACTGAAA TATGGAGTTG AAATATTTGC GGAGATACTT GTTGAAGGCA TATCTCGAAT AAAAAGATGT ACTGATGAAG GACGTGTTCT CATGTCATTA GATCTTCAGG TTCTAATAAA CGGGCTACAG CACTTTGTGC CAACAGATGT GAAGGAAAAG TTAAAGATAG TCGTAACATT TATCAAGGCG TACTATCTGC CAGAGACGGA ACATGTTCAC TGGGCAAGGG CTCATCCGGA ATATACAAAA GCACAGGTCC TTGGACTGGT GAATTTAGTA GCCACCATGA AAGGTTGGAA AAGGAAAACG CGGCTGGAAG TTATCGAGAA GATCGAATCA GCTTCACTGT AGATCAACTA GAAGCATCTG GCAGCTTCAC GACATCAGAT GTGAAAGGAG TCATATTGTG ATGTGAAAGT TTGGAAGAAA GAATGGGCCA AAGTTGTGGT GACTTCGTTA TTTCTCCAAC CATTTTTAAT GCAACACATG GCTCATCTAC TGGTACCTGT TTTTT 
Length3705
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11709632.. 11718367
Download Sequence
A.thaliana
AGI-codeAT2G27900.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg470399 Protein of unknown function (DUF2361)
4.47214 Ahg495894 cyclic nucleotide gated channel 5
8.48528 Ahg474980 Protein kinase superfamily protein
8.94427 Ahg487414 ARM repeat superfamily protein
9.48683 Ahg481510 Xanthine/uracil permease family protein
10.5357 Ahg474398 Transducin/WD40 repeat-like superfamily protein
13.5647 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
15.1658 Ahg473379 GHMP kinase family protein
17.0294 Ahg472338 squamosa promoter binding protein-like 14
19.4165 Ahg483096 Staphylococcal nuclease homologue
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression