| Annotation |
|---|
| Description | jgi|Araly1|481838|fgenesh2_kg.4__898__AT2G29200.1 |
| Sequence |
ATGATACCGG AACTGGGAAG AAGACCGATG CATAGAGGTA ACGAAGATTC ATCTTTTGGG GATGATTATG AGAAAGAGAT TGGAGTATTA CTTGGTGAGC AGCAGAGAAG GCAAGTAGAA GCTGATGAGC TTGAGAGAGA GCTTAACTTG TATAGAAGTG GCTCTGCTCC ACCGACTGTT GATGGTTCTG TTAGTGCTGC CGGAGGGCTT TTTAGCGGCG GAGGTGGGGC TCCTTTTTTG GAGTTTGGCG GCAATAAGGG TAATGGGTTT GGTGGTGGTG ATGAGGAGTT TAGGAAAGAT CCGGCTTACT TGTCTTATTA CTATGCTAAT ATGAAGTTGA ACCCGAGGTT GCCACCGCCT TTGATGTCTA GGGAGGATTT GAGGGTTGCT CAGAGGCTTA AAGGGAGTAG TAATGTTTTA GGTGGTGTTG GGGATAGGAG AAAAGTTAAT GATAGTCGAT CTTTGTTCTC TATGCCACCT GGTTTTGAGG CTGAGAAAAC TGGTGCTTCT GCTTCTGAGT GGGATGCTAA TGGATTGATT GGTTTACCGG GTTTGGGACT TGGAGGCAAG CAGAAGAGTT TTGCTGATAT CTTTCAGGCG GATATGGGGC ATGGACATCC CGTTGCTCAG CAGCCCTCAC GTCCTGCAAG TCGTAATACC TTTGATGAAA ATGTTGACTC TAAAAATAAT CTGTCTCCAT CTGCATCACA AGGCATTGGT GCACCATCTC CATACAGCTA TGCAGCTGTT CTGGGCTCTT CTTTGTCTAG AAATGGAACT CCAGATCCAC AGGCCATTGC TAGGGTGCCT AGTCCCTGTC TTACTCCCAT TGGGAGTGGG AGAGTGAGTT CAAATGATAA GAGGAACACA AGTAACCAAA GCCCGTTCAA CGGTGTTACA TCTGGTCTCA ACGAGTCTTC TGATCTTGTC AATGCTTTAT CTGGCATGAA CCTGTCTGGC AGTGGCGGGT TAGATGAACG TGGTCAGGCT GAGCAAGATG TCGAAAAGGT CAGGAACTAT ATGTTTGGAC TGCAAGGTGG GTATAACGAA GTCAATCAAC ATAGGTTCCC AAACAAATCT GATCAAGCCC ATAAGGCAAC TGGCTCGTTG AGGGATTCAC AATTGAGAGG GCCACAAGGA TCTGCCTATA ATGGTGGAGT TGGATTAGCT AATCCTTACC AGCATCTTGA TAGCCCAAAT TATTGTCTCA ACAATTATGC ATTAAATCCA GCTGTAGCTT CTATGATGGC TAACCAACTT GGGAACAATA ATTTTTCTCC AATGTACGAT AATGTATCCG CAGCATCCGC TTTGGGATTT TCTGGAATGG ACTCCAGACT TCATGGAGGA GGCTTTGTAT CTTCTGGTCA AAACCTCTCT GAATCACGTA ATCTTGGCAG GTTCAGTAAT CGAATGATGG GAGGAGGTAC TGGTCTCCAG TCACATATGG CGGACCCAAT GTATCATCAG TATGCTGATT CGCTTGATCT TCTCAATGAT CCTTCGATGG ACATGAACTT TATGGGTAAT TCATACATGA GTATGCTTGA ACTCCAGAGG GCTTTTCTCG GAGCTCAGAA ATCACAGTAT GGTCTTCCTT ACAAATCCGG GAGCCCTAAC AGCCATAGCG ATTATGGGAG TCCAACATTT GGGTCTAACA TATCATATCC TGGCAGCCCA TTGGCTCATC ATCTTCTGCC AAATTCTCTT GTGTCACCCT GTAGCCCTAT GAGACGAGGT GAAGTTAGTA TGCGATATCC CTCTGCAGCA AGAAATTATT CGGGAGGAGT AATGGGGTCT TGGCACATGG ATGCTAGTTT GGATGAAGGC TTTGGATCTT CAATGCTTGA AGAGTTCAAA AGTAACAAAA CAAGAGGATT TGAACTCTCT GAAATAGCTG GCCATGTTGT AGAGTTCAGT TCGGATCAAT ATGGAAGCCG GTTTATTCAG CAGAAACTCG AGACAGCAAC AACTGATGAG AAAAACATGG TTTATGAGGA GATCATGCCA CATGCTCATG CCCTGATGAC TGACGTTTTT GGAAACTATG TGATTCAGAA GTTCTTTGAG CATGGACTCC CGCCACAGAG AAGAGAATTG GCAGAGAAAC TCTTTGACAA TGTTTTGCCT CTTAGCTTAC AGATGTATGG TTGTCGTGTC ATCCAGAAGG CAATTGAGGT GGTTGATCTA GACCAGAAAA TTAAAATGGT GAAAGAACTT GATGGACATG TGATGCGATG TGTACGTGAT CAGAATGGGA ATCATGTGGT TCAAAAGTGT ATCGAATGTG TGCCTGAAGA AAACATCGAG TTTATTATTT CAACTTTCTT TGGTCATGTG GTGACCCTCT CCACTCACCC ATACGGGTGC CGTGTAATTC AGAGAGTATT GGAACACTGC CATGACCCTG ATACTCAGAG TAAGGTTATG GAAGAAATCC TTTCCACTGT TAGTATGCTG GCCCAAGATC AGTACGGAAA CTATGTTGTT CAGCATGTGC TGGAGCATGG AAAGCCTGAT GAGCGCACTG TGATAATCAA AGAGTTGGCG GGGAAGATTG TTCAGATGAG CCAGCAGAAG TTTGCATCAA ACGTTGTTGA GAAATGTTTG ACTTTTGGAG GTCCTGAGGA ACGGGAATTT CTGGTGAATG AGATGCTGGG CACAACTGAT GAAAACGAGC CTCTTCAGGC GATGATGAAG GATCAGTTTG CAAACTATGT AGTGCAGAAA GTTTTGGAGA CATGTGATGA CCAACAACGT GAGCTGATAC TTACTCGCAT CAAAGTGCAT CTTAATGCTT TAAAGAAATA CACTTATGGA AAGCATGTCG TTGCGCGTAT TGAAAAACTC GTTGCTGCTG GAGAGAGGAG AATGGCTTTG CAGTCCCTAA CCCAGCCTCA GATGGCGTAA GGCCGCAAGT GTTGTACAGC TTAACTAGGG TGGATGGCTC TGCCATAGCG TTTTGAGAAT TAGGTAAGAT CTAAACCGGA AATAATCTGC GGGAAAATTG TGAAGGAGAG CTTTGTTTTC TCTGCAAGAT CTGTAAAATT GTGTAGTTGC TTACGGTTTT TCTATACATA GAACCAAACA TCCCACTTTA GGCTGATG |
| Length | 3108 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 12756026.. 12759952 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G29200.1 |
| Description | pumilio 1 |
| TAIR curator summary | Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. |
| Alias | [APUM1][PUM1][pumilio 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg919585 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 3 |
Ahg920910 | pfkB-like carbohydrate kinase family protein |
| 6 |
Ahg937129 | metalloendopeptidases;zinc ion binding;DNA binding |
| 6.32456 |
Ahg943541 | SET domain-containing protein |
| 10.4881 |
Ahg926567 | Methylthiotransferase |
| 14.4222 |
Ahg484577 | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein |
| 16.0624 |
Ahg474290 | Amino acid dehydrogenase family protein |
| 16.7332 |
Ahg922101 | cleavage and polyadenylation specificity factor 30 |
| 19.8997 |
Ahg487099 | NRAMP metal ion transporter family protein |
| 20.4939 |
Ahg483834 | CDPK-related kinase 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|