Detail



ID : Ahg481995

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481995|fgenesh2_kg.4__1055__AT2G30780.1
Sequence
CAGATCCGAT TCTGTCTACT AGTAAATTTT TAATCCATGA CATCGAATTT TATGAAATTC AGCAGTCAAT TTATCGGCAA ATTCACCCGT GTAACTAGCT TACCAGCTCA TCACACTGAT TTGGTTCAAA GGGTTTCGAT TTTAAAAGAC GAGCTTTTAA CGATTGGTAA TAGTAAGGAA AAGTTCCAAA ACGTTTTGGA TCAGAAAGGG CAATGGTTGT TTAAAAGTTA TCGTGATGGT GCTGGGATCT TGGAGCTTAT GGATCAACTC TTTCCTCGTC ATTACTTAGC TCTTCAGGTT TTAGAGTGGA GGAGAGGGCA GAAGGATTAC TGTATCCCAT TGACATCGGA GGAGTATGCC AAAGGAATCA AAATTGCGGG TCGAGCTAGG GATATTAACC TTGCAGTCTA TCTTTTCGAT GAGGCGGCTA AGAAACGAAG TCAGACTGCT TCAGTTTACA ATGCTTTGAT GAGTGTTTAC ATGTGGAACG GGCTTGCTGA TGAATGTCAG TCGCTTTTTA AAGATTTCAG GAGGCAAACG CATTGTGCTC CGACCGTTGT GACCTATAAT ATTCTAGTAT CAGTTTATGG TCGACTTTTG ATGGTAAAGA ATATGGAAGC AGCTTTCGAA GAATTACAAA AACTGAAGCT TTCTCCCAAT TCTGTCACTT ACAACTTTCT GATTGCTGGT TACATGACTG CCTGGAATTG GGATAAAATG GAAGCTACTT TTCAAGAAAT GAAGAGGGGT CTAGTTGAGC CAGATACAGA TACTTATCAG CTAATGCTTC GTGGGTATGC AAATTCTGGG AATTTGAATA AGATGGAAGA AATGTATGAA GTGATTAAAG ATCAGGTTGG TGTAAACAGT AGTCCTTTGG TCAGAGCGAT GATCTGTGCA TATTCTAAGA AAGCTGTTGA TGATAGAGTC CAAAAGGTTG AAAATTTATT GAGTCTTCTC TCTGGGGAGG AATATCTTCC TTGGTTGAAC GGGCTTTTGA TTCGACTATA TGCTCAAGAA GACATTGTGG AAGCAATGGA GGGTAAAATC AACGAGGCAT TTGAGCATAA GACATGTGTT AATAAGTCAA GTATTATGCG GGCAATAATT GCAGCCTACT TCAGGTGTAA TGAAGTTGAC AATCTTGCTT ATTTCGTCAA GCGTGCTGAG TCTGCTGGCT GGAAACTATG CAGATCTCTC TACCACTGTA AGATCATGAT GTATGGATCC CAAAAACGTT TTGAAGAAAT GGAAGGTGTT TTAAATGAGA TGGCAGAGAC TAACTATGGG CTTGTGACTA AAACGTTCGC CATTATGTAT AAGGCTTATA AAAATCATGG AATGGAGTCA GATGCTGAGA AAGTGAAGGG AATGATGCTG AAACGTGGGC TTTAGATGAA CTTCAATTTG CGCAAAGAAT TCTGTTGTTT TGATTTGTTC AGTGTCTTTA TCAGGTGTGC GCTGTACCAA ACAGAGTATC ATATGGTTAG TGCTGTTTCT GCCTTTGCAT AAGTCTCCTG TTTATAGTGA CTTACCAGGG GGTTGTGCTT AGCATTTGGT CTCTTTTTTT ATCAATCAGG TTGTAGAACT GTGCTCCATC AGGCTGAATA AAAGATGCTG GATAGGCTTC CATGATCTGT CATTAGGGGT TTTGGGATGA GACTAGCCCA CATTTATTTT CTCGTCATGA GTGACTCAAC CGTCACTATT CTGCCATAGT TGTACATGTT ACGGGCAGAG TTTAAAATGT CCATGGCAGA TTTTGGTCCT GTTGATAGAT GAGAAACCCC ATGAAGAACA GTGCCTCCGC TATCTGGATA TTCTTGCTGA TAGGATTAGA AGAGCTATGA TTTCCTTCTT ACTGAAGGCT CTGCCAAGTG AAGTTATTTC CTTAAAGAGA AACCTGGCTG ATGTTGCAGT GGCTTTCTCT TTCTGCCACC CCTGGGTTCA GTTTCCAGAT TGTTGTTGTT AGGCTATCAA CAGTCTTGTC TTAGATTCAC ATACTGCTCT ATTGTTTAGG CTTGAGCCCT GTTTGTAATT TTAAGGAAAC CTGATAGCTC AGCTACACAT GATGTTTCAG TATAGTGGGA C 
Length2091
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13705349.. 13713541
Download Sequence
A.thaliana
AGI-codeAT2G30780.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
26.8328 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
40.8044 Ahg486840 Protein phosphatase 2C family protein
45.0333 Ahg919766 F-box family protein
52.8204 Ahg485551
55.3986 Ahg479219 Nucleotide-sugar transporter family protein
56.8507 Ahg311551 lipoyltransferase 2
62.2254 Ahg475062 Pentatricopeptide repeat (PPR) superfamily protein
63.498 Ahg491344 ABC transporter family protein
67.1714 Ahg477950 HCO3- transporter family
70.7672 Ahg495592 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression