Detail



ID : Ahg482009

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482009|fgenesh2_kg.4__1069__AT2G30910.1
Sequence
CATCTCTCTC TTTCACTTCA CGTCGTCGAG CTCCGGATCT CATCGGCGTT TCATCATTCT CCGTCGATCT ATTCACCGTA CGACTCCGTT ATTAGGAATC TGTAGATGTC AATTTGAGAG AAAAGACTAT CTGTCTCCAT TACAACACAT TATGGCGGTG GTGGATGTTC ATCGGTTCGC TGAGTCAATC ACTTGCCATG CGTGGAGTCC TGATCACTCC ATGGTTGCTC TCTGTCCTAA CAATACTCAA GTTCATATCT ATAAATCATC ATCTCAAGAC CAGTGGGAGA GGTTACATGT CCTCCAAAAG CATGACCAAA TTGTTTCTGG AATTGACTGG AGCTCAAAAT CCAACAAAAT CGTCAGTGTT TCTCATGACA GGAACTCGTA CGTGTGGAGC CTGGACGGAG GTGAGTGGGT ACCAACTCTT GTTATTCTTA GACTAAATCG TGCTGCACTT TGTGTCCAAT GGAGCCCGAA AGAGAACAAG TTCGCTGTTG GAAGTGGTGC TAAAACTGTT TGTATTTGCT ATTACGAGCA AGAGAATAAC TGGTGGGTCA GTAAACTTAT CCGGAAAAGG CACGAATCTT CAGTCACATC TGTTGCTTGG CATCCTAATA ATATTCTTCT GGCAACGACA TCTACAGATG GAAAATGTCG GGTATTTTCA ACATTCATCA AAGGAGTTGA TACAAAGGAT TCAAAAGCAG GCTCACCAGC GGAAACTAAA TTTGGGGAGC AAATTCTTCA GCTTGATCTC TCATATTCTT GGGCATTTGG TGTGAAATGG TCTCCAAGTG GAAACACCTT AGCTTATGTA GGCCATAGCT CCATGATTTA CTTTGTTGAT GATGTTGGTC CTTCTCCTTT AGCCCAAAGC GTTGCATTCC GAGATTTGCC TCTTCGTGAT GTCCTGTTTA TTTCTGAGAA AATGGTGATA GGTGTTGGAT ATGACAGCAA TCCAATGGTA TTTGCTGCAG ATGATACTGG AATATGGAGC TTTATCAGAT ACATCGGAGA GAAGAAAGCG GCATCTTCAA ATTCCAGTTA CAGTTCGCAG TTTTCCGAAG CATTTGGAAA ATTCTACGGT AGTCAATCAA AGTCTGCAAC AGCCAATGAT GCTTCTGAAT CACGTGGACG CGTTCATGAT AACTGCATAA ATTCTATTGT GCCTCTGAGC AAAGCAGGGA GTCCTAAAGT TATGCGATTC AGCACTTCAG GATTGGATGG CAAAGTAGCC ATATGGGATC TGGAGAACAT GGAACAAGAA CTTGGCAATC AGTTTTAATA AACACACAAA TAAAACAAAT CTGGATCACA AGCAACGTTT TACTTATTTT ATAACTCTTT TTCCAATTTC GTATTTGTTT CACTTTGTAA ACTACAATAA TAAAAGGCCT TATTTTCTTG GTTTGTGTAA GGGCAGGTAT TATTAATAAG TTTCTTGGCT TCATGATTTG ATTCATTTAG TTAGCATCTG GTAATACATT TTTCAGCATT GTGTCGAAAG GAGTCC 
Length1516
Protein Sequence
Protein Residue
Map Locationscaffold_283: 5683.. 9388
Download Sequence
A.thaliana
AGI-codeAT2G30910.1
Descriptionactin-related protein C1A
TAIR curator summary
Alias[ARPC1][ARPC1A][ACTIN-RELATED PROTEIN C1][actin-related protein C1A]
Gene coexpression
MR
MR Locus Description
10.7238 Ahg949533 Protein of Unknown Function (DUF239)
12 Ahg472744 Amino acid kinase family protein
36 Ahg321255 Zinc finger C-x8-C-x5-C-x3-H type family protein
49.2341 Ahg489030 calmodulin 6
51.3809 Ahg479917
51.5364 Ahg317721 Concanavalin A-like lectin family protein
52.6118 Ahg931395 golgin candidate 1
55.2359 Ahg485935 Pectin lyase-like superfamily protein
56.6039 Ahg480961 Protein of unknown function (DUF803)
57.4456 Ahg941931 septum site-determining protein (MIND)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression