Detail



ID : Ahg482115

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482115|fgenesh2_kg.4__1175__AT2G31900.1
Sequence
ATGGGGACTC CTGTAAATAT CACACTCGGG TCACATGTCT GGGTCGAGGA TCTAGAACTC GCATGGATTA GTGGAGAAGT GATTGAAATC AAAGGCACCA ATGCCAAAAT AGTCACTGCA AATGGGAAAA CTGTTGTTGC TAGTATTTCT AGTATATATC CAAAGGATAC AGAGGCGCCG CCTGCAGGTG TTGACGACAT GACTAAACTG GCTTACCTCC ATGAGCCAGG GGTCCTCCAC AATCTAGATT GCCGTTTTGC ATTAAACGAG ATATATACTT ACACCGGAAA CATCTTGATT GCGGTGAATC CATTCCAAAG ACTTCCGCAT TTGTATAGTG TCCATATGAT GGAGCAATAT AAAGGAGCTG CGTTTGGAGA GCTAAGCCCG CATCTGTTTG CTGTTGCAGA TACCAGTTAC AGGGCGATGA TTAATGAGGC AAGAAGCCAG TCTATTTTGG TTAGTGGAGA GAGCGGAGCT GGAAAAACAG AGACAACCAA AATGCTCATG AGATATCTTG CATTCATGGG AGGCAGATCA GATACCGAAG GGAGAAGCGT TGAACAACAA GTTTTAGAGT CTAATCCAGT GTTGGAAGCT TTTGGAAACG CCAAAACTGT GAAAAACAAC AATTCAAGTC GGTTTGGAAA ATTTGTTGAG ATCCAATTTG ACAAGCGTGG GAAAATATCT GGAGCTGCCA TCCGCACTTA TCTTCTTGAA CGGTCTCGTG TTTGCCAAGT TTCAGACCCT GAGAGGAACT ATCACTGCTT CTACATGCTC TGTGCAGCAC CGCCTGAGGA AGCTAAGAAA TTCAAGGTAG GGGATCCAAG GACGTTCCAC TATCTAAACC AGACGAACTG CTATGAGGTT TCCAATGTAG ATGATGCAAG AGAGTATATT GAGACTAGAA ATGCCATGGA CATTGTGGGC ATTGGACAAG AGGCACAGGA TGCCATATTC CGAGTCGTAG CTGCAATCCT CCACCTTGGA AATGTCAATT TTATCAAAGG AGAAGAAGCA GATTCTTCAA AACTCAGGGA TGATAAATCA AGATATCATC TTCAAACAGC AGCAGAATTA CTCATGTGCA ATGAGAAGAT GATGGAAGAT TCACTCTGCA AGCGTGTTAT TGTCACTCCG GATGGTAACA TTACAAAGCC GCTTGACCCA GAATCAGCAG CCTCAAATCG TGATGCTTTA GCCAAGACAG TATACTCCAG GCTGTTTGAC TGGATTGTGG ATAAGATCAA CAGTTCAATA GGTCAAGACC CAAATGCTAA AAGCTTGATC GGAGTCCTCG ACATTTATGG TTTTGAAAGC TTCAAAATCA ACAGTTTTGA GCAGCTATGC ATCAATCTCA CAAATGAGAA ATTACAACAG CATTTCAATC AGCATGTATT CAAGATGGAG CAAGAGGAAT ACACGAGGGA GGAAATAAAC TGGAGCTATG TTGAATTTGT TGATAACCAG GATGTCTTAG ATCTTATTGA GAAGAAACCA GGAGGCATAA TTGCCCTACT TGATGAAGCA TGCATGTTTC CCAAGTCGAC TCATGAGACG TTTGCACAGA AGATGTATCA AACATATAAA GGACACAAGC GTTTCAGCAA ACCTAAGCTT GCCCAAACAG CCTTCACTGT TAACCACTAT GCAGGAGATG TTACGTATTC AGCGGAGCAA TTTCTTGACA AGAACAAGGA TTATGTTGTG GCAGAACATC AAGCTTTGCT AGATGCATCG AAGTGCTCTT TTGTCGCCAA TTTGTTTCCA CCACTTCCAG AAGACGCATC AAAGCAGTCC AAATTTTCAT CCATAGGGAC CCGTTTCAAG CAACAACTCC AAGCTCTAAT GGAGACGCTG AACACAACAG AGCCCCATTA TATTAGATGT GTGAAGCCAA ATGCAGTTCT GAAGCCCGGG ATTTTCGAGA ATGACAACGT CCTAAACCAA CTAAGATGCG GAGGTGTACT GGAAGCTATA AGAATCAGTT GTGCTGGTTA TCCAACAAAA CGAGCTTTCG ATGAATTCCT AGATCGTTTT GTGATGTTAG CAACAGACGT TCCAGAGGGA ACCGACGAAA AATCGGCATG TGCTTCGATC TGCGACAAGA TGGGTTTAAA AGGCTACCAG ATAGGAAAAA CAAAGATATT TCTTAGGGCC GGACAGATGG CTGAACTAGA TGCAAGAAGA ACCGAGGTCT TGGCTGGTGC CACTACACTC ATTCAGAGGC AGATCAGGAC TTATTTGACA AGAAAAGAGT TCCTTGGGCA GAAAAAGGCT ACAATTTATA TGCAAAAACT TTGGAGAGCA CAACTTGCTC GCAAGTTGTA TCAAAACATG CGAAGAGAAG CTGCTTCAAT TTGTATCCAA AAGAACATTC GTGCTCACAG AGCAAGGAAA AACTACACTA AGCTCCAGGC ATCAGCAACA GTTATTCAGA CTGGTTTACG GACAATGTCT GCTCGAAACA AGCATAGACA TAGAAGAAGA ACAAAGGCAG CAATTATAGT TCAGAGGGAA TGGAGAAGAC ACCAAGCTCA CGAAGCTTAT AAGCAGCACA AAAAAGCAAC ATTAGCATTA CAATGTCTAT GGAGAGCTAA AGTAGCTCGA AAAGAGCTTA AAAATCTCAG AATGGCTGCA AGAGAAACTG GGGCGCTCAA GGAAGCCAAG GACAAGTTAG AGAAACGTGT GGAAGAGCTA ACCTGGCGTC TCGAATTAGA GAAGCATCAA AAGGCTGATC TCGAAGAAGC CAAAGCACAA GAAATTGCTA GACTACAAAA TAATTTAACT GAATTGCAAG AGAAGCTAGA TGAAGCCTAC GCTGCAATTA TACGAGAGAA AGAAGCAGCA AAATTAGTCA TTGAACAAGC TCCACCAGTC ATCAAAGAGG TTCCAGTTGT AGATAACACT CAACTGGAGT TACTGAACAG TCAAAACAAT GAGCTGGAGG TTGAGGTGGC AAAACTAAAA GGAAAAATTG AGGAGTTTGA AGCGAAATGT TCTGCACTTG AGAGTGATAG CAAGGCAAGT CTAACTGAAG CAGAAGATGC AAAATCAAAG GCCATCCAAT TTCAAGAAAT CATCGAAAGA TTACAAACGA ACCTGTCAAA CCTTGAATCC GAAAATCAGG TCTTGCGTCA GCAGGCTTTG GCCGCTTCAA CAAGCGTTGA AGAGACTGGA GAGTTAAACA GCCTGAAGGA TAAGGTTGCA ATTCTAGAGT CAGAAAATGA ATCTCTTCGA AGACAGACAG CTTCTGCAGA AAAGACAATG CCTCCTGCAA GAGTTTTTGC GTCCGAAAAG AATCTTGAAA ATCAACATCA AATAAAAGAA ATTCAGGCAA CAAAGGAACC AAGGAATCCA ATCAATGTGT TAGCAAAACA AGGGTCTCTA ACAGATAGGC AACGGGAGAG CCATGAGGTG CTGATGAAAT GCCTCACTGA CGAGAGAAGG TTTGATAACG ACAGATGTGT GGCAGCTTGG ATAGTTTACA AGGCACTACT TCAATGGAGA TTATTTGAAG CAGAGAAAAC AAACATATTT GATAGAATTG TTCATAAGAT TCGATCGTCC ATTGAGAAGA GCCAAGATGA CACAAGGGAA CTAGCTTATT GGCTCACAAC AAGCTCTACC CTCTTATATC TTCTCCAATC TACACTCAAG TTCAGCAATA CAAATAATGC GGCTTCAAGA CGTAATAGAT TATCCCATGC TACACTATTT GGGCGATTGG TTCAAGGAAC ACAATCATCT TCAGTGGGCT TGGAAACATC CAGTGGCTAC AGTGGGATGG TTGGAATTTC AAATGACCAA CAGATGGTCG AAGCTAAATA TCCGGCTTTA CTATTCAAGC AACATTTAGC AGCATACGTT GAGAAAACAT ATGGCATGAT CCGAGATAAA CTAAAGAAAG AGATAGATCC ATTACTAAAT CTCTGTATCC ATGCACCAAG ACCAACAAGA GCCAAAACCT TGCGAGATGT GACTAAAAGC ATCCACTTGA CCACAATTGC CAAGCAACAA GCATCATATG TACAATGGCA GAACATTGTC AACAAGCTTG AACATACCTT GACCTTTATG GCAGAGAACC AGGTCCCATC TATGATCACA AGAAAACTCT TCCATCAGGT TTTCTCGTAC ATCAATGTGC AGCTCTTTAA TAGTTTGTTG CTTCGCCGAG AGTGTTGTTC GGTTAGCAAC GGAGAATATC TTAAAATGGG CTTGCATGAA TTAGAGAAGT GGTGCCTGAA GGCAGACGAC GAGGCAGCAC GATCACCATG GGATGAACTT CAGCACATAA GGCAAGCAGT GATGTTTCTG GTCTCACATC AAAAGACACA GAAATCATTG GACGAGATTG CAAAAGAAAT ATTCCCGGTA CTAAGCATTC CACAAGTATA TCGAATTGGG ACTATGTTTT GGGACGACAA ATATGGAACT CAAGGACTCT CCCCTGAGGT GATCAATCAG ATGAGGAAAC TAATGGCGGA AGATTCAGCC AACATGACTT ACCCTTCTTT CTTGCTAGAC GTCGATTCAA GCATTCCTTT CTCAGTGGAA GATGTTTCGC AATCTTTCCA CGGCGGCAAC ATTAGTCTCT CCGACGTCGA TCCACCGCCG CTTCTCCGCC AGCGATCTGA TTTTCACTTC TTGTTCCAGA CATTGCCGGA GTAA 
Length4674
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14301863.. 14310756
Download Sequence
A.thaliana
AGI-codeAT2G31900.1
Descriptionmyosin-like protein XIF
TAIR curator summaryEncodes an novel myosin isoform.
Alias[ATMYO5][ATXIF][XIF][MYOSIN 5][MYOSIN XI F][myosin-like protein XIF]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg485408 P-loop containing nucleoside triphosphate hydrolases superfamily protein
37.51 Ahg946237
73.4847 Ahg487097 laccase 11
74.4849 Ahg487492
97.55 Ahg475392 glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression