Detail


ID : Ahg482247

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482247|fgenesh2_kg.4__1307__AT2G33100.1
Sequence
ATGGCTTCAA GTCCACCAAA GAAGACCTTA AATTCACAAT CTTCCCCCTT AAGCCGGCCT CCACAAGCTG TCAAGTTTGG TCGCCGGACG TCCAGTGGTC GCATTGTTAG CCTCTCCCGT GACGATGACA TGGACGTCTC TGGCGATTAC TCCAGCCAAA ATGATTACAT CAATTACACC GTCCTCATGC CTCCAACACC AGACAACCAA CCTGCTGGCT CCTCCGGGTC CACCTCGGAG TCGAAAGGTG ATGCAAACCG AGGTGGAGGA GGAGGAGACG GGCCTAAGAT GGGGAATAAG CTGGAGAGGA GATTATCTGT CATGAAATCG AATAACAAAT CAATGTTGTT GAGGAGCCAG ACGGGAGATT TTGATCATAA CAGGTGGTTG TTTGAGTCTA AAGGAAAATA CGGTATTGGA AACGCGTTTT GGTCAGAAGA GGATGATACG TATGATGGTG GCGTTAGCAA GTCCGATTTC TTAGACAAGC CATGGAAACC TCTCACGAGG AAAGTTAAGG TCCCGGCCAA AGTTCTTAGT CCCTACAGGT TATTAATCGT GATTCGTCTT GTGATAGTCT TCTTCTTCCT TTGGTGGCGT GTTACGAATC CTAATGAGGA TGCAATGTGG CTATGGGGAC TGTCGATAGT CTGCGAGATT TGGTTTGCTT TCTCTTGGAT TCTTGACATT CTTCCGAAGC TAAACCCTAT AAACCGAGCC ACGGACCTTG CTGTCTTGCA TGACAAATTT GAGCAGCCCT CTCCGTCAAA TCCCACTGGT CGCTCTGATC TTCCCGGTGT TGATGTGTTT GTTTCCACGG CTGACCCAGA AAAAGAACCG CCTTTAGTCA CTGCAAATAC CCTTCTCTCG ATCCTTGCCG TGGATTATCC AATTGAGAAG CTTTCTGCCT ACATTTCAGA CGATGGTGGT GCAATTCTCA CCTTTGAAGC CATGGCTGAA GCTGTTCGTT TTGCTGAGTA TTGGGTGCCA TTTTGCAGAA AACATGATAT AGAGCCACGG AACCCGGATA GTTACTTTAA CATTAAAAAG GACCCTACAA AAAACAAGAA AAGGCAAGAT TTTGTCAAAG ATCGTCGTTG GATCAAGCGT GAGTATGACG AATTCAAGGT CAGGATCAAT GGTCTTCCAG AACAAATCAA GAAAAGAGCT GAACAATTCA ACATGAGAGA AGAGCTCAAG GAGAAGCGAA TTGCCCGAGA GAAAAATGGG GGCGTATTGC CGCCAGATGG GGTTGAGGTG GTAAAAGCAA CGTGGATGGC TGATGGTACG CATTGGCCAG GGACATGGTT TGAACCTAAA CCTGATCATT CAAAAGGGGA TCACGCCGGA ATTCTACAGA TCATGAGCAA AGTGCCTGAG CTTGAACCGG TTATGGGTGG ACCGAATGAA GGCGCTCTGG ATTTCACAGG AATTGATATT CGCGTACCTA TGTTTGCTTA TGTCTCGCGT GAGAAACGTC CAGGTTTTGA CCACAACAAG AAAGCCGGTG CCATGAATGG TATGGTTAGA GCTTCAGCCA TACTATCCAA TGGCGCGTTC ATCCTGAATC TAGACTGTGA TCACTACATC TACAATTCCA AAGCTATCAA GGAAGGAATG TGTTTCATGA TGGACCGAGG CGGTGACAGG ATCTGTTACA TTCAATTTCC ACAACGATTC GAAGGAATCG ACCCATCTGA TCGATATGCA AATCACAATA CCGTCTTCTT CGACGGTAAC ATGAGAGCGC TAGATGGGTT ACAAGGTCCT GTCTATGTCG GAACAGGGTG TATGTTCCGA AGGTATGCTC TCTATGGATT CAACCCACCT CGAGCCAATG AGTACTCAGG CGTGTTCGGT CAGGAAAAGG CTCCAGCCAT GCATGTCCGG ACTCAGTCCC AAGCATCCCA AACGTCCCAA GCGTCTGATT TAGAGTCTGA TACACAGCCT CTTAATGATG ATCCAGATCT TGGTTTGCCT AAAAAGTTTG GTAATTCGAC CATGTTCACA GACACTATTC CGGTTGCAGA GTACCAAGGA CGGCCTCTAG CAGATCACAT GTCGGTTAAA AACGGAAGAC CACCCGGTGC TTTGCTCCTG CCACGGCCTC CCCTTGACGC TCCAACAGTG GCTGAAGCCA TAGCTGTCAT TTCTTGCTGG TATGAAGACA ATACCGAATG GGGAGATAGA ATCGGATGGA TTTACGGGTC GGTCACTGAA GACGTGGTGA CAGGTTATCG TATGCATAAC CGTGGTTGGC GGTCCATTTA CTGCATCACA AAACGCGATG CTTTCCGTGG CACAGCTCCA ATCAATCTCA CTGACCGTCT CCATCAAGTT CTCCGTTGGG CCACAGGCTC TGTAGAAATC TTCTTCTCTA AGAACAACGC CATGTTCGCG ACCAGAAGGC TCAAGTTTCT CCAGCGAGTC GCCTACCTCA ACGTCGGGAT CTACCCTTTT ACCTCCATCT TCTTGGTCGT CTATTGCTTC CTCCCTGCTC TCTGTCTCTT CAGCGGAAAA TTCATCGTAC AGAGCCTCGA TATCCACTTT CTCTCCTACC TTCTCTGCAT CACCGTAACC CTAACCTTAA TCTCACTCCT GGAGGTCAAA TGGTCGGGAA TCGGACTGGA AGAATGGTGG AGAAATGAAC AGTTTTGGTT AATAGGAGGC ACAAGCGCTC ATCTCGCAGC AGTCGTTCAA GGTTTGCTCA AAGTAATAGC CGGAATCGAA ATCTCCTTCA CCCTGACATC GAAATCCTCA GGAGAAGACG AAGATGACAT CTTCGCTGAT CTTTACATAG TAAAATGGAC GGGCTTATTC ATCATGCCGC TTACAATCAT TGTAGTGAAC CTTGTTGCGA TAGTGATTGG AGCTTCCAGG ACAATATACA GTGTGATTCC GCAATGGGGC AAGTTACTAG GAGGAATATT CTTTAGTTTA TGGGTCTTGA CTCATATGTA TCCGTTTGCT AAAGGATTGA TGGGTCGAAG AGGAAAGGTT CCAACAATTG TTTATGTTTG GTCCGGGCTT GTGTCGATTA CCGTGTCGCT GCTTTGGATC ACCATTAGTC CTCCAGATGA TGTTTCAGGC AGTGGAGGAA TCTCAGTGTA AATTTGGATC AGAATGTAAA AACTGAGTGG ATTTTTCTCT TTTTTTTTTT TTTTGTAAAA GTAATTTTGG TTTATGTAAA TTTATGTTGA AACAGACCAA TTATTGCTTT CCTTCGTGTT AGCTTTTGAG ACTTACCGTT GTTACATGGA ACTGAAACAA ACAGTTTTTT TC
Length3282
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14891263.. 14894997
Download Sequence
A.thaliana
AGI-codeAT2G33100.1
Descriptioncellulose synthase-like D1
TAIR curator summaryencodes a gene similar to cellulose synthase
Alias[ATCSLD1][CSLD1][CSLD1][cellulose synthase-like D1][CELLULOSE-SYNTHASE LIKE D1]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg344999 glutamate receptor 3.5
11.225 Ahg921142 NAD kinase 2
28 Ahg928811 senescence associated gene 20
31.3209 Ahg928023 Malectin/receptor-like protein kinase family protein
31.4643 Ahg924040 SC35-like splicing factor 33
39.2173 Ahg489168 Zinc finger, C3HC4 type (RING finger) family protein
47.1169 Ahg487184 Patatin-like phospholipase family protein
47.5815 Ahg322489 P-loop containing nucleoside triphosphate hydrolases superfamily protein
50.892 Ahg493888 WD-40 repeat family protein / zfwd3 protein (ZFWD3)
54.4702 Ahg923840 Ubiquitin-conjugating enzyme family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression