Detail



ID : Ahg482279

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482279|fgenesh2_kg.4__1339__AT2G33380.1
Sequence
AATGTGTACG TCTTCTGCAT AAGAAGAAAC AATTATTAAC ACTTACACAA GACAGAGATA GTAAGAGAGT ATGGCAGGAG AGGCAGAGGC TTTGGCCACG ACGGCGCCGT TAGCTCCGGT CACCAGTCAG CGAAAAGTAC GGAATGATTT GGAGGAAACG TTACCAAAAC CATATATGGC AAGAGCATTA GCAGCTCCAG ATACAGAGCA TCCGAATGGA ACAGAAGGTC ACGACAGCAG AGGAATGAGT GTTATGCAAC AACATGTCGC TTTCTTCGAC CAAAACGACG ACGGAATCGT CTATCCGTGG GAGACTTATA AGGGATTTCG TGACCTCGGT TTCAACCCAA TTTCCTCTAT CTTTTGGACC TTACTCATAA ACTTAGCGTT TAGCTACGTT ACACTTCCGA GTTGGGTGCC ATCACCATTA TTGCCTGTTT ATATCGACAA CATACACAAA GCCAAGCATG GGAGTGATTC GAGCACCTAT GACACCGAAG GAAGGTATGT CCCGGTTAAC CTCGAGAACG TATTTAGCAA ATACGCGCTA ACGGTTAAGG ATAAGCTATC TTTTAAAGAG GTTTGGAATG TAACCGAGGG AAATCGAATG GCAATCGATC CTTTTGGATG GCTTTCAAAC AAAGTTGAAT GGATACTACT CTATATTCTG GCAAAGGACG AGGAAGGTTT CATTTCTAAA GAAGCTGTGA GAGGTTGCTT TGATGGAAGC TTATTTGAAC ATATTGCTAA AAAGAACAAA GAGAGGGCCA ATTCTCGCAA ACAAGACTAA GAAAATTTGT TTGGTTAGCG AATAAAGC 
Length818
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15035549.. 15037011
Download Sequence
A.thaliana
AGI-codeAT2G33380.1
DescriptionCaleosin-related family protein
TAIR curator summaryEncodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers. Isoform of caleosin with a role as a peroxygenase involved in oxylipin metabolism during biotic and abiotic stress.
Alias[AtCLO3][CLO-3][CLO3][RD20][Arabidopsis thaliana caleosin 3][caleosin 3][RESPONSIVE TO DESSICATION 20]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg313693 UDP-glucosyl transferase 78D1
7.61577 Ahg490755 Lipase/lipooxygenase, PLAT/LH2 family protein
8.94427 Ahg482863 lipid transfer protein 1
9.27362 Ahg926704 Kunitz family trypsin and protease inhibitor protein
14 Ahg930129 Major facilitator superfamily protein
16.3095 Ahg479094 nitrile specifier protein 4
18.7083 Ahg483737 plasma membrane intrinsic protein 1B
20.4939 Ahg486407 enzyme binding;tetrapyrrole binding
20.7846 Ahg945300 early nodulin-like protein 2
22.2486 Ahg485932 ABC-2 type transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression