Detail



ID : Ahg482484

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482484|fgenesh2_kg.4__1544__AT2G35190.1
Sequence
GGTTTTCGGT AACGCAGGTT TTCAAAATCT TCTCATTTTC GTCCCTTCGA GCCAAATCAA TGGCAAAAAA ATAGCTTTTA GAAATCCCCA CGACCAAAAA AAAAAAATGT CCGAGAGAAA TTATCGAGAA AAAAAAATCT TCGTGTAGGG GAGAGAGCTT GTGCCCAAGA TTTTGAATTC TGTCTCTTCG TTATCGATTT TGAACAACCA CATTGTTCGT AGATCTGAAA AAACAAGAAA AACTCACGGG TTTGGTTCTT ACGATTTGCT CGGTGATTTT GACATTACGA TTCGATTGTT TTGTTGAGCT ATTGATTCGA TTCCGGATCC ATACGGATCT AATCTCGGCG AGTCGATTCG TGGTCGACAT TTTCAAAAGC TGTTCGCGTG GATCTGAAGA AGAGACATTG TTGTCTTTGT TATATCGCAC TGAAATTTTC TGGGAAAGAA TGGATCCAAT ATCTGCGGTT AGCGAAGAGC TGGCTGAGAT CGAAGGACAG ATCAATGACA TTTTCCGTGC TTTATCAAAT GGATTCCAGA AGCTGGAGAA GATCAAAGAT GCTAATAGGC AGAGTAGGCA GCTGGAAGAA CTCACTGACA AAATGCGTGA CTGTAAGAGC CTTATTAAAG ATTTCGATAG GGAAATCAAG AGCTTGGAAA GCGGTAATGA TGCCAACACT AACCGCATGT TGAACGATAG ACGACAATCT ATGGTTAAGG AACTCAACTC ATATGTTGCT CTTAAGAAGA AATACTCATC TAACCTAGCA AGCAATAACA AGCGAGTAGA TCTTTTCGAT GGACCCGGAG AAGAACACAT GGAAGAGAAT GTCTTATTAG CTTCAAACAT GTCCAATCAA GAGCTAATGG ATAAAGGAAA CTCAATGATG GATGACACAG ATCAAGCCAT TGAGAGAGGG AAAAAGATTG TTCAGGAGAC TATAAATGTG GGAACAGATA CTTCAGCAGC TCTCAAGGCT CAGACCGAGC AAATGAGTAG AGTTGTCAAT GAGCTCGATT CTATTCATTT CTCACTCAAG AAAGCCTCCA AGCTGGTCAA GGAAATTGGT AGGCAGGTTG CCACTGACAA ATGTATTATG GCATTTCTTT TCCTTATCGT TATTGGTGTC ATAGCAATCA TCATCGTCAA GATTGTGAAC CCAAACAACA AAGACATCCG CAACATACCT GGCCTAGCTC CACCAGCCAT GAACCGACGT TTGCTCTGGA ACCATTACTG AACAAACAAT ATCTCATTTT CAGGCCATTC AAAATACTGG TACGTCGAAC ATTTTTTTGT CCCATACACT TCTTGGTCCT CCCCGAAGTC CATGTTGTTG TAGATGAAAC CGCCTCACTT GAGAAATTAA CCAGTTTCTA TTCACATGGC TCTTGGCGGC TGTGCCTTTG AGCAGTCACA GGAATCAAAT TCCCCTTTCG TTAAAAGTCC CAGAATCAAA ACCATCTTTT TTAGCTCATG TGTTTGTATA AGGATGACTC TTTGTGTTAT ATCATATGTA CGTGTATTTC TAAAACGTCG TCTCTGTTTC ATGTTCTGGT AATAAAAACT TGTT 
Length1574
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15840251.. 15842938
Download Sequence
A.thaliana
AGI-codeAT2G35190.1
Descriptionnovel plant snare 11
TAIR curator summaryplant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.
Alias[ATNPSN11][NPSN11][NSPN11][novel plant snare 11]
Gene coexpression
MR
MR Locus Description
14.3178 Ahg480107 FASCICLIN-like arabinoogalactan 7
18.8944 Ahg491877 GDSL-like Lipase/Acylhydrolase superfamily protein
22.3159 Ahg487523 Eukaryotic aspartyl protease family protein
33.8821 Ahg495659 FASCICLIN-like arabinogalactan 1
38.3406 Ahg943148 Cupredoxin superfamily protein
46.6583 Ahg496451 tubulin beta chain 2
47.3709 Ahg480563 plasma membrane intrinsic protein 2;8
51.7011 Ahg481792 Pathogenesis-related thaumatin superfamily protein
52.8204 Ahg485285 IQ-domain 21
55.2721 Ahg928939 Leucine-rich repeat (LRR) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression