Detail



ID : Ahg482686

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482686|fgenesh2_kg.4__1746__AT2G37025.1
Sequence
ATCGTTGCGG ACTTGAAACG CACGTTATAT TACACGGTGT CTTACGTCAT TTGGATTTCA AAATTAAATA AATCAGCTTT TGGAATCCCA AACCAAAAAA AAAACAAAAA AACAAAATCC TAAGTCCAAC AGTCGCCATT TCACCTCCTG CGTCAGAGTT CTTCGTCTCC TCTCGTCGTC TCTGTTTGTG TAAAAACTTG GACCTTGACT TGAAATGGGA CCTTTTGGGA TGGACACAAC ACCAGAGTTT CCTGATACTT TTGCTGGATT CAAGTCTGGC AGTGTTGATG AGATTCTTGG TCATTCAATG GAGGATAAAA TGAGTGACAT GAAGCATTTC CTAATGGATC CTAATCATGA CAATACTGCG GTGAACAGTT TCTTAGGTCT CGGTATGGAG AATATGGGGT TAAGCTCCAA GATGGAGGAA TTTTCTCATG GATTTGACTT TAGCTTTCTC CCAGATTATG GTGGACTAAA CTCTTATAGC ACTAAAGATG TGGAAGCAGG TTTGAAGTTT GAGATTCTTG ATGGATTTCT GGATGGAGTC GATGAAGTGG AAGATATCTA CGCATCACAT GATCTTTCTT CTATTGGTAA CCATTTCCTT CCAGAAACTG AAGTCAAGAA GAAAGTATCT GAATTAGATG GTGACCCCTA TGGTCTTATG AACTTGAGTT CAGAATCTTT TTCTCCTGGA ATTAGTGGAA GCATTGGACT CTCGGAGTGG TCAAAAGAAA CTGTTCCACA TGCTGAATCC CAGAATGTAT CCAGCGAAAA GTTTAAAGAT AGTTTGGACT CAAATGAGTC AGAAGATGAC AAGAAACCAC TATCCACTTT TATAGGCTCT TGGGTTAAAC GAGGCAAAAA TCGGAAAAAG AATTTGCTCA ACACCGCTTG TAGGAGATTA GATTCTTCTC GTGAAAGAAT GTCTTGCGTG TCCTATGACT TCAGGCCCCG GAAAGGACCT ATGAAGAAAT ACATTCACAT TTCAACTGAG AATACATTTA CTCAGTCATA CACACCAATC TTAACCAGAA GTGACAGGAG AAAGAATCAG AGGATGTGGA CTGTTGATGA AGTGATGAAG TTGGTTGATG GTATTTCTCA CTTTGGTGTA GGAAAATGGA CCGATATAAA GAACCTCTTC TTTCATTCTG CAGCGCACCG CACACCCGTT GATATCAGAG ACAAATGGCG TAATCTACTG AAAGCAAGTT ATAACGATAG AGAGGCTGAA GAAAAACGAA AGTCAGTGGC TCGCTCTATA CCGAAGGAAA TTCTACATCG TGTTAGAGAA CTTGCTTCAC TCCATCCATA TCCGTTCTCC AAATCATCTT GTTTCGTTCA TGATTCCTCA AGAAGCCGAA GCACTTCAAG GAAGAAGAAG AAGAGGAGTT GATATTAATA GTTTTCATGG AGAAAGCCTA GAGAAGCTGT AAAGATACTA AAATCGTTTT AATTGTCTTG GAAAGTTGTT CCATGTGAAG TTTCTGTTAA TGAAACCGAG AATGACTTCA ATTCAGAAAA GCATTTTGCT TATTTCCTCT 
Length1550
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16762164.. 16765183
Download Sequence
A.thaliana
AGI-codeAT2G37025.1
DescriptionTRF-like 8
TAIR curator summary
Alias[TRFL8][TRF-like 8]
Gene coexpression
MR
MR Locus Description
19.8242 Ahg313119 RNA-binding (RRM/RBD/RNP motifs) family protein
31.305 Ahg358300 P-loop containing nucleoside triphosphate hydrolases superfamily protein
31.749 Ahg476993 RNA-binding (RRM/RBD/RNP motifs) family protein
40.1995 Ahg478968 Legume lectin family protein
47.3709 Ahg940511 MATE efflux family protein
50.7543 Ahg929588 phragmoplast orienting kinesin 1
52.2015 Ahg488725 Protein of Unknown Function (DUF239)
53.4603 Ahg478170 Leucine-rich repeat protein kinase family protein
59.3212 Ahg478021 Pectin lyase-like superfamily protein
59.7495 Ahg478905 Plant protein of unknown function (DUF641)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression