Detail



ID : Ahg482761

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482761|fgenesh2_kg.4__1821__AT2G37640.1
Sequence
CCTATCCAAT ACACATCTCT CTCTCTCTCT CTCTCTCAAT GACGGCGACT GCGTTTGGAA TCGGCTTGTG GTTGGCCGTT ACGGCTTCCT TTCTCTTCAC CGCTTCAAAC GCCAAAATCC CCGGCGTTTA CAGCGGCGGC CCGTGGCAGA ACGCACACGC CACTTTCTAC GGTGGTAGTG ACGCCTCCGG CACAATGGGC GGCGCGTGTG GGTACGGGAA CTTGTACAGC CAAGGATACG GTGTGAACAC GGCGGCGTTG AGCACTGCTC TGTTCAACAA CGGATTCAGC TGCGGTGCTT GTTTTGAGAT TAAGTGTACT GATGACCCGA GATGGTGTGT TCCGGGAAAT CCGTCTATTC TTGTGACGGC GACAAACTTT TGTCCACCGA ATTTCGCTCA GCCGAGTGAC GACGGAGGAT GGTGTAATCC GCCGCGAGAG CATTTTGATC TCGCCATGCC TATGTTCCTC AAGATCGGTT TGTACCGTGC CGGCATTGTC CCCGTCTCCT ATCGCAGGGT ACCTTGTCGG AAGATAGGAG GGATAAGATT CACAGTAAAC GGATTCAGAT ACTTCAATCT TGTTCTGGTA ACTAACGTTG CCGGCGCCGG AGATATTAAC GGAGTTAGCG TAAAGGGATC AAAGACAGAT TGGGTGAGGA TGAGTAGGAA CTGGGGACAG AACTGGCAGT CCAACGCCGT CCTCATCGGC CAATCACTCT CTTTCCGAGT CACCGCCTCT GATCGACGTT CCTCCACCTC ATGGAACGTT GCTCCTTCCA CGTGGCAGTT TGGTCAGACT TTCTCCGGCA AAAACTTCCG AGTCTGAAGT CCGAAAACAC CCAACAGAAT GTTATTTTTA TTTTATTTTT AATATGGGAG ACAGAAACAA GAAGAGAGAT GGGACATTTT CCAGCCCTGG GTTTTCTCTT TAATTTTCTT GGGAAAATTC CGGTGGCTTG TGGAAAATAT TTCCTTTTTT AGTATTATTA TCAGCAAAAT TTCTTTTTAA TGTTTGCGAT TTAAGAGTGA TTTGTTTTTC TTTTGGTTAT GTTTCCCTTA GTTACTTCGT TGGTGGCATC TTCTTTCTGC AAATAAGCCA AAGAGTGGGG ATCAGTCTTA TGATCGAGTC GGATGGACCG TGTAATAGGC CATTGGGCCA ATATATATAT AAAATCTGAA ATT 
Length1183
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17125981.. 17128119
Download Sequence
A.thaliana
AGI-codeAT2G37640.1
DescriptionBarwin-like endoglucanases superfamily protein
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.
Alias[ATEXP3][ATEXPA3][ATHEXP ALPHA 1.9][EXP3][EXPANSIN 3][ARABIDOPSIS THALIANA EXPANSIN A3]
Gene coexpression
MR
MR Locus Description
29.1033 Ahg903120 Zinc-binding dehydrogenase family protein
98.0255 Ahg912296 Paired amphipathic helix (PAH2) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression