Detail



ID : Ahg482767

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482767|fgenesh2_kg.4__1827__AT2G37678.1
Sequence
GACCCTCTGA AAGTGGAAAG AGCATTTTTT AAAGAGTAAT AAGAAAAACA ATTATCTTTG AACTCTCTCT CTCTCTCTGC GATCTATGCC TGAAGTGGAA GTGGATAACA ACAACGAGAA GCCATCTGAG ATTAACAGTA ACATACTAAC ATTTTCCATC ATGATCATAA GTAGTAGTAA AAATGTGTTG AAAATGGAAG AAGAAGTTGA GGTGAGCAAG AAGAGGAAAT TTCAGACAGA TCAATCTGAT GAGTTATCAT TACTACCTCT TTCCAAGCAC GCTTGTTTCG CCAATGTTGC TTGTTCTGAC AATACCAATG TTAGCTCGGA GATTGATACA GAGTATTCAA TGTCTTATGT GAACTCAACA ACTTCTATGG AATGTAACAA TGATATTGAG ATGAAAGAGG AATCATCTGG ATCGTGCGGT GAAGACAAGA TGATCTCTTT CGAAAGCCAT CTAGATTACA TCTATGGGAC TCAGAATCTG GAGGATTTTT CAGATAAAGT CATTGAAAAC ATTCTCTATC TCGATGAACA AGAAGAAGAA GAAGAAGCTA AAGGATTTAG TAGTAATGCT GCTAAGTTTG TTCTGTCCTC TGGGAGATGG ACTGTTAACC AAGATTCTTC TACTATACAT GAGCCAAAGA AGCCAACCAT TGATCAAGAA TTTGAACAAT ACTTCTCAAC ACTAATGCTG TGACATAATG ATGTTAAGAC TCAAAACATA TATGAAGATA TGTACATAGA GCTGTACTCA TTCTGTTTTG ATTCTTGTCA ACCTTAAAAC GTTCAATTCA AAGTGATTAG AGAGCTTCTT TGAAATGTTT GTAACTCTAG TCTTCAACTT TCAAGATTTT GATTAGC 
Length867
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17279056.. 17280387
Download Sequence
A.thaliana
AGI-codeAT2G37678.1
Descriptionfar-red elongated hypocotyl 1
TAIR curator summaryPositive regulator of photomorphogenesis in far-red light. Most abundant in young seedlings in the dark. Downregulated in the light and older as plants develop. Localized in the nucleus and the cytoplasm. Nuclear localization strongest in the dark. Degraded through the 26S proteasome. Regulated by PHYA. It is specifically required for the light-regulated nuclear accumulation of phyA but not phyB.
Alias[FHY1][FRY1][PAT3][far-red elongated hypocotyl 1][FAR-RED ELONGATED HYPOCOTYL 1][PHYTOCHROME A SIGNAL TRANSDUCTION 3]
Gene coexpression
MR
MR Locus Description
13.4907 Ahg329577 Galactose oxidase/kelch repeat superfamily protein
52.8394 Ahg473416
65.2227 Ahg472548
72.5672 Ahg476384 Protein of unknown function (DUF1677)
94.3292 Ahg343982 purine permease 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression