Detail



ID : Ahg482844

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482844|fgenesh2_kg.4__1904__AT2G38330.1
Sequence
GAACATCATC ATGTGGCTCT CTTTCTTCCT CCTCCGCCGA GATTTTTCTC CGTCTCTCTC TTCTCCGCAA TGGCGGCGGT CGCAACCTCC TTCTGTTTCT CTCCCCTTCG ATCGCCGTCA CTTTTCCAAC TCCACAATCT TTCTCTAAAC CCTAATTCAT CGATTCGAAG AACAATCCTC TGTAAATCAT CGCCTCGCGA TGAATCTCCC GCCGTCACCG CTTCTTCTCG GCGACCGGAA AAACAGCAGA ATCTAGTGGA ATCTCCCAAA CCGGATCCTG ATCACAAACC GGATCCTGGG ATTGGTAAAA TTGGAATGGA GATTATGTCA ATTGCCTTAC CTGCTGCTTT AGCTTTAGCT GCTGATCCTA TAACATCTCT TGTCGACACT GCCTTCGTTG GCCATATTGG TTCTGCAGAA TTAGCTGCAG TAGGAGTATC AGTTTCTGTA TTCAATTTGG TGTCGAAGCT CTTCAATGTT CCTTTGCTAA ATGTCACAAC ATCGTTTGTT GCGGAGGAGC AAGCAATTGC TGCTAAGGAT GATAGTGATT CTATAGAAAC AAGCAAGAAA GTGCTGCCTT CTGTTTCAAC ATCTTTAGTT CTTGCTGCTG GAGTTGGTAT TGCAGAGGCG ATTGCGCTAT CTCTCGGCTC TGATTTCTTG ATGGACGTCA TGGCTATACC TTTTGATTCA CCAATGCGGA TACCAGCAGA GCAGTTCCTC AGACTTAGAG CGTATGGTGC ACCACCAATT GTAGTGGCAT TGGCTGCGCA AGGAGCTTTT CGAGGTTTCA AAGACACAAC AACGCCTCTA TATGCAGTTG GCAAAAGTAT GACCGATATT TACATGATTG TCAATTGTTG TTATTTCAAT CTTGCGGGGA ATGTTCTTAA TGCGATATTA GATCCAATCC TGATATTTGT CCTTGGTTTT GGTATCTCTG GTGCTGCAGC TGCTACCGTG ATTTCTGAAT ACTTGATTGC ATTTATTCTT CTGTGGAAGT TGAATGAGAA TGTAGTTTTG CTCTCTCCTC AAATCAAAGT GGGAAGAGCC AACCAGTACC TCAAATCAGG TGGGCTTCTG ATTGGTAGAA CGGTGGCTTT GCTTGTGCCA TTCACATTAG CTACTTCGTT AGCAGCTCAA AATGGACCCA CTCAAATGGC TGGCCATCAA ATCGTCTTGG AAGTCTGGTT GGCTGTCTCT TTACTCACCG ATGCTTTAGC CATTGCTGCA CAGAGTCTTC TTGCCACCAC TTTCTCTCAA GGAGAATACA AACAAGCCCG GGAAGTTATC TTCGGAGTCC TTCAAGTAGG ATTAGCAACT GGAACTGGTT TGGCTGCTGT ATTGTTCATC ACTTTCGAAC CATTTTCAAG CTTATTCACA ACGGATTCAG AAGTTCTAAA GATTGCTTTG TCAGGGACCT TGTTTGTGGC TGGATCTCAA CCGGTGAATG CTCTAGCGTT TGTTTTGGAT GGGCTTTATT ATGGTGTCTC TGACTTTGGA TTTGCCGCCT ATTCTATGGT GATTGTCGGA TTCATATCTT CCTTGTTCAT GCTTGTGGCT GCACCAACGT TTGGCCTTGC CGGGATCTGG ACTGGTTTAT TCCTCTTCAT GGCATTGCGG TTGGTTGCCG GAGCCTGGAG ATTGGGAACA AGAACCGGTC CATGGAAAAT GCTGTGGTCT GCTCCAGAGA AGCCAGAATG AGAGGGATCG TTGTTTTTTG CGGTATGATG CGTGACTCTT AAGTTAAGAT AATGAAAATG TAGTAAACTA ACAGTGTAAA AAACAGAGTC TTATAGT 
Length1797
Protein Sequence
Protein Residue
Map Locationscaffold_4: 17650050.. 17653028
Download Sequence
A.thaliana
AGI-codeAT2G38330.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.48074 Ahg476537
6.7082 Ahg489460
8.06226 Ahg483334 vascular plant one zinc finger protein 2
13.4907 Ahg493259 RNA polymerases M/15 Kd subunit
14.2478 Ahg472068 Pentatricopeptide repeat (PPR) superfamily protein
19.799 Ahg922958
21.8174 Ahg479606 Cell differentiation, Rcd1-like protein
26.3249 Ahg945247 SET domain protein 16
26.9444 Ahg925691 Arginyl-tRNA synthetase, class Ic
28.5657 Ahg919857
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression