Detail



ID : Ahg483048

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483048|fgenesh2_kg.4__2108__AT2G40090.1
Sequence
GCGTTCATTA CGTGCTTCCT CAATGGCGGC ACGATCCCTT TGGAGAACCC GTACGAAGCT CCTCGTTGTT GGTACCTCTT TATGCGGTGG TTCCGGCGCC GCCTTCATTG CTTCCTCCGA TGACCCATCA ACCACCCTCA AGCTTTGCAC CTCCATCCCC GTCCGCCTCT ACCGCAATAC CGTTACCGCC GCCTCTATCG CTTTCGATTA TGAATACTCA TTGTTGGGTT TGGCTGAGGG AAGCAGTGAG AGGGCTAAGG TCAAACATGA AGTCCACCTA AGGTCAGCTC AAAAGCTTCA AGAGCTTTGT TTCAAAAATG GAGGAATCTA TATCAAACTC GGCCAACATA TAGGACAACT TGAATATCTT GTGCCTGAAG AGTATGTTTG TACTATGAGA GAGTCCATGT TGAACAAATG CCCTGTTTCT TCGTATGAGC AAGTATGTGA GGTTTTCAAG AAAGAGGTTG GAGAGATGCC AGACAAAGTA TTTGCTGAAT TTGACCCTGT TCCAATTGCA AGTGCTTCCC TTGCTCAAGT TCATGTTGCT CGCACCCATG ATGGAAAAAA AGTTGCTGTC AAGGTTCAAC ATGCGCACAT GACAGACACT GCTGCTGCGG ACACTGCTGC TGTGGGAGTT TTAGTGAACA CCTTGCACAG GATATTCCCA TCATTTGACT ATAGGTGGTT GCTAGACGAA ATGAGTGAAA GCTTACCAAA GGAACTAGAT TTTTTGGTTG AGGCAAAAAA CAATGAGAAA TGTCTGGATA ATTTTAGGAA GCTGTCTCCC CATATTGCAG AGTATGTTTA TGCGCCAACA ATCTATTGGA ATTTGAGTAC CTCTAAGTTG TTGACAATGG AGTTCATGGA TGGTGCTCAA GTGAACGATG TTGCTAAGAT CAGAAAGCTT GGGATTCAGC CCTATGAAGT ATCAAAGCTT GTGAGTCAAA CTTTTGCAGA AATGATGTTT AAACATGGGT TTGTGCACTG TGACCCACAC GCTGCCAATT TGATTGTTCG TCCAGATCCT TCTGGTAAAA GGAACATATA TGGCAAGAGA AAACCGCAAC TAGTGATTCT TGACCATGGC TTGTACAAGG AGCTTGACTT CAACACAAGA TTCCACTATG CTTCACTATG GAAAGCGTTG GTCTTTTCGG ATGCTAAAGC CATTAAAGAA CACAGCGCGA AATTAGGCGC TGGAGATGAT CTATACGTGC TATTCGCGGG GATTCTTACA ATGAGACCAT GGAAGCAAGT CATTGACACA TCTGTGGATC ATTTAGTCAT CCAAGGCAGC AAAGAAGATG TATCAGAGCT ACAGATGTAT GCATCACAGT ACTTCTCCGA AATCTCAGAG CTTCTGAGGA GATTGCCACG CGTAATCCTT CTGATGCTGA AAACAAACGA CTGTCTGCGG TCGGTTAACA ATGAACTAAT GCAAGGATCG TCGCTGGAGT CGTTCTTGAT CATCGGGAAA GTATCTTCGC AAGCGGTTTT AGAGGCAAAG AGGTCTGAAA AGAAATCGTT GATGAAATGG CTAAAGGTAT GGCTTGAAGG ATTCTCTGTT GAAGCAAGGC TTTGGGTAAT GCAATTTGCA CTTTGGGTCT TACAAGTCAG AAAATCCTTA ACCTTATGAT ATATAATGTC ATAAACCAAT TAATATTACA CATCTTTCTC TATTCTTTGG TAAGTGGGTT TCAAAATTAA CATTTATCAT TCTTTGTATA CTACACAAGG CTGTTATGTA CCAAACCAAT AAATCAACTT TATATGTACT ATAAGATTTG TATTATTTGT ATGCTGGGAA GAGCATATTA CTTTTTAATA TTTATATATA TAAATCTTAT TGTCTTC 
Length1857
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18514490.. 18517632
Download Sequence
A.thaliana
AGI-codeAT2G40090.1
DescriptionABC2 homolog 9
TAIR curator summarymember of ATH subfamily
Alias[ATATH9][ATH9][ABC2 homolog 9]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg496605
8.30662 Ahg480370 Regulator of Vps4 activity in the MVB pathway protein
11.0454 Ahg496587 chromatin remodeling 24
12 Ahg913177 Leucine-rich repeat (LRR) family protein
25.2982 Ahg485697 Thioredoxin superfamily protein
30.5941 Ahg314795 Kinase-related protein of unknown function (DUF1296)
32.0312 Ahg314229 winged-helix DNA-binding transcription factor family protein
33.8083 Ahg479967 proline extensin-like receptor kinase 1
34.5543 Ahg477176 DROUGHT SENSITIVE 1
36.3318 Ahg482011 coenzyme Q 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression