| Annotation |
|---|
| Description | jgi|Araly1|483062|fgenesh2_kg.4__2122__AT2G40160.1 |
| Sequence |
ATGAAACAAA TCGATGGCAG AGAAAGGAAA GCTTACCTTT CTCTGCTATA CTTTGCCGTC ATTCTTCTAC CCGTATTCCT TCTCGGATGC TATCTTTACA ACGAGAAGCA GCTGAGGATT GGCCAGTTTC AGGAATTCAA GACACATAAC CTGCAAGAAC ACATCAGTCC ACCACAACAA AGCAAAGAAG ATAAAGACAA GAAGACTGAT GTTGTTCCAT TAGAAGCCTG CGATGTTTTC ACAGGAAAAT GGGTTCTTGA TAACATCACA CATCCTTTAT ACAAAGAAGA TGAATGTGAG TTTCTCTCAG AGTGGGTGGC ATGTACGAGA AACGGGAGAC CAGACTCTAA GTACCAGAAA TGGAGATGGC AACCTCGAGA TTGCTCTTTG CCAAGGTTCG ACGGAAAGCT GCTGCTAGAG AAACTCAGGG GAAAGAAACT GATGTTCGTT GGTGATTCAA TACATTACAA TCAGTGGCAA TCCATGGTTT GTATGGTCCA ATCCTTGATT CACTCAGGCA AAAAGACCTT AAAACACACA GCACAAATGT CAATCTTCAA CACAGAGGAG TACAACGCAA CCATAGCATT TTACTGGGCA CCTTTCTTAG TAGAATCAAA CACTGATCCT CCAGACAAGA GAGACGGGAA GACCGATCCA GTAATCATAC CGCAATCAAT CTCGAAACAC GGCGAGAACT GGAAAGACGC AGACTACCTT GTATTCAACA CCTACATATG GTGGACCAGA CATTCCAAGA TCAAAGTTCT AAAACAAGAA TCTTTCAACA AAGGTGACTC AAAAGACTAC GATGAAATCG GAATCTATAT CGTATACAAA CAAGTGTTAT CAACATGGAC AAACTGGCTA GAACAAAACA TAAACCCAAA TCAAACATCA ATCTTCTTCA GCAGCATGTC ACCAACTCAT ATCAGAAGCT CAGATTGGGG ATTCAATGAA GGAAACAAGT GCGAAAAAGA GACAGAACCA ATACTAAATA TGTCAAGACC AATAGATGTT GGAACAAATC GAAGACTTTA CGAAATCGCA GTGAATGTAA CGAAATCAAC AAAAGTGCCG ATACATTTCC TCAACATAAC GACAATGTCA GAGTATAGAA AAGATGGGCA TACCTCATTT TACGGTTCGA GAAGTGGGAA ACTCATAACG CCGGAGCAGA AATTGGATCC GAGAACTTTT GCTGATTGTT ATCATTGGTG TCTTCCGGGA TTGCCTGATA CATGGAACGA GTTGCTCTCT CTGTATATTA TCTACAAAAG TTGATGTTTT TTCGATTGAA TGTGAAAATT TACAAACACC AGATTCCGAC TTCAACGGGA ACGTCCAAAG TCGCCGGAGA AGAGACGAGA GAGCGACGGT GAAGAAATTA GAGAGAACTT TTTAATTAAA TACCGGGGAT AATCGGTTTA GAACCGGTCG TGTCTTACCA AATTTCT |
| Length | 1457 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 18573964.. 18575825 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G40160.2 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL30] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 15.2315 |
Ahg923812 | |
| 40.0375 |
Ahg496210 | Defensin-like (DEFL) family protein |
| 51.3323 |
Ahg938272 | Putative adipose-regulatory protein (Seipin) |
| 55.0999 |
Ahg483175 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 61.8708 |
Ahg915600 | Disease resistance protein (TIR-NBS-LRR class) family |
| 63.0952 |
Ahg316004 | Protein of unknown function (DUF1163) |
| 69.1375 |
Ahg333307 | |
| 69.9643 |
Ahg891240 | |
| 80.8332 |
Ahg948274 | RING/U-box superfamily protein |
| 83.5225 |
Ahg933796 | CCT motif family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|