Detail



ID : Ahg483182

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483182|fgenesh2_kg.4__2242__AT2G41140.1
Sequence
AATTCATGGG GATCTGTCAT GGTAAACCCA TCGAACAGCA ACAATCAAAA AGCCTCCCAG TTTCCGGCGA AACAGATGAA GCTCCGACGA ATTCACAGCC ACCGGCGAAA TCTTCCGGCT TTCCGTTTTA CAGCCCAAGT CCTGTACCTA GCTTATTCAA ATCCTCACCT TCCGTATCTT CGAGCGTGAG CTCAACGCCT CTTCGTATCT TCAAGAGACC TTTCCCTCCT CCTTCTCCTG CTAAGCACAT ACGAGCTTTC CTCACGCGTC GCTACGGCTC TGTCAAGCCC AATGCGGTTT CGATTCCCGA AGGCAAAGAG TGTGAGATTG GTCTCGATAA GAGTTTTGGG TTTTCGAAAC AGTTTGCTTC ACACTACGAG ATTGATGGTG AGGTGGGTCG TGGACATTTT GGGTATACTT GCTCTGCTAA GGGTAAAAAA GGTAGCTTGA AAGGTCAAGA AGTTGCTGTT AAAGTTATTC CTAAATCAAA GATGACAACT GCAATTGCCA TTGAGGATGT TAGTAGAGAA GTGAAGATGT TGCGGGCTTT GACTGGTCAT AAGAACCTAG TCCAGTTTTA TGACGCGTTT GAAGATGATG AAAATGTTTA TATTGTCATG GAATTATGCA AAGGTGGTGA ACTCTTGGAC AAAATACTTC AAAGGGGTGG AAAATACTCA GAAGATGATG CTAAAAAAGT TATGGTTCAG ATTCTCAGTG TTGTGGCTTA CTGTCATCTA CAAGGTGTTG TTCACCGTGA CCTTAAACCC GAGAACTTTC TTTTCTCAAC GAAGGATGAG ACTTCTCCTC TGAAAGCAAT TGATTTTGGT CTTTCTGATT ATGTCAAGCC AGACGAGAGG TTGAATGATA TTGTAGGAAG TGCATACTAC GTGGCCCCGG AAGTTTTACA CCGTACATAT GGAACTGAAG CTGACATGTG GAGCATAGGA GTGATTGCTT ATATTCTTCT CTGTGGCAGT CGACCCTTCT GGGCCCGTAC TGAATCCGGA ATTTTTCGAG CTGTCCTAAA GGCAGAACCG AATTTTGAAG AAGCTCCTTG GCCATCCCTA TCACCTGACG CTGTAGATTT TGTGAAAAGA TTGCTTAACA AAGATTACCG TAAACGACTA ACTGCGGCCC AGGCTTTGTG TCATCCCTGG CTGGTTGGCT CGCATGAACT AATGATTCCA TCTGATATGA TCATATACAA GCTTGTAAAA GTGTACATAA TGTCAACTTC ATTGAGAAAA TCAGCTTTAG CGGCTCTTGC CAAGACATTA ACTGTACCGC AGTTAGCTTA TCTGCAGGAG CAATTCACAT TGTTGGGGCC AAGCAAAAAT GGATATATCT CTATGCAAAA CTACAAAACA GCAATCCTAA AGAGTTCAAC AGATGCTATG AAGGATTCAC GAGTGTTAGA TTTTGTTCAC ATGATAAGTT GTCTTCAATA CAAGAAACTA GATTTTGAAG AGTTTTGTGC TTCAGCATTA AGCGTTTATC AGCTCGAAGC AATGGAAACA TGGGAGCAAC ATGCACGGCG TGCTTACGAG TTGTTTGAGA AAGACGGGAA TAGACCCATC ATGATTGAAG AACTTGCATC GGAACTCGGA CTCGGGCCAT CAGTGCCGGT GCACGTTGTT CTCCAGGATT GGATAAGACA TTCTGATGGC AAGCTTAGTT TCTTAGGCTT TGTCAGATTA CTACATGGCG TGTCTTCCCG GACCTTACAA AAAGCTTAGA GTAACGCCAT TGTTAGATGA GAAAAGATGC GACTAGGTGG AGTAGATCTG GTTTCTTCTT TTCTTTCCAC TTCTTGATAG TTTTTTTAGT TTTCTTTTTC TATTCATGGG TAAGCGTCTG AGTCAAAGAT TCGATAATTA TGTCTGTGAG TGTATGTGTG TGTGGTGGGA AGGAAAAGTT TATGAAGAAG AGGAATGTAC AGAATGAGAC ATATCCGATT ATTGTTTTAA TCCAGTGATG TTTACGTGTG AAGCACTCTT TTAATGACCG CCGGAAAAA 
Length2019
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19029970.. 19033485
Download Sequence
A.thaliana
AGI-codeAT2G41140.1
DescriptionCDPK-related kinase 1
TAIR curator summaryEncodes CDPK-related kinase 1 (CRK1).
Alias[ATCBK3][ATCRK1][CRK1][CDPK-related kinase 1]
Gene coexpression
MR
MR Locus Description
22.3607 Ahg481833 pumilio 3
30.9354 Ahg317971 ubiquitin-specific protease 13
36.1386 Ahg493575 xylogalacturonan deficient 1
38.2492 Ahg930437 AMP-dependent synthetase and ligase family protein
44.4972 Ahg481680 P-loop containing nucleoside triphosphate hydrolases superfamily protein
48.4974 Ahg480549 multimeric translocon complex in the outer envelope membrane 132
72.8697 Ahg484347 Protein kinase superfamily protein
85.8487 Ahg331786 CLUB
86.5448 Ahg331952 Protein kinase superfamily protein
91.1921 Ahg475731 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression