Detail



ID : Ahg483223

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483223|fgenesh2_kg.4__2283__AT2G41460.1
Sequence
ATGAACAAGG TTCTTCAGTT AGGTCTCCAG AGCTCCGTCA TCAATGTCGC CAAGTTTCTG GTAGTGCCTC TTAGGAGTTT AAGAGTTGGT TCATCTATCG TTGGAGGAAC AAGAAGTTTC AACAAGAGGC TTATGTCAAA TGCTACAGTT ACAGTTAAAT CTGTACCTTT CTCTATCAAC AACAGCAAAG GAAAGGAACT CAAGATAGTA GGAGCAGCTA CTGATCAGAA TTGTCTTCAG ATGGGAAGTG ATATTGGTAG AGCTGAAATG GGAACTCTTC AAGATGATCA AAAGGATATT GAGGCGATGA CGGTTCTAGA ACTTAGAGCC ACATTGAGGA AAATTCTTGT TCATTGTTTA AACATGAAAC TTGGGCTACC TGTGAAAGGA CGCAAACAAA AACTTATCTC AACTTTACGA CTTCATATGG ACAGCAATTT ACCTGATCAA AAGGAAACTA CTTCGTCCAC CCGTTCAGAA AGTGTCACGA TCAAAAGAAA GATCAGAAAC AGGGAAGAGC CTACTGAAGA TGACTGCAGT AACTCTGAAG CTTATGGCAC TGAACAAGGA GAAAAAAGAG TAAAACAGTC TACTGAGAAA AACTTGAAAG CTAAAGTTTC TGCGAAAGCC ATCTCGAAAG AACAGAAGTC ATTGACAAAA ACAGGTAAGC AGCAAATTCA TTCAAAAGAG GAAGCATCAT CGACCATCTC TAGTGTATTA CTGAAACCTG AAGAAATGAT CTCATCCCTG AGTCAAAGTG AACCGTGGAC TGTACTTGCT CATAAGAAGC CTCAGAAGGA CTGGAAAGCT TATAACCCAA AGACAATGAG ACCTCCCCCT CTACCAGAGG GTACCAAGTG TGTGAAGGTT ATGACTTGGA ATGTTAATGG ACTGAGAGCA TTGTTGAAGT TAGAGAGCTT CTCTGCTCTG CAGCTTGCGC AAAGAGAAAA CTTTGATATC TTGTGCTTGC AGGAGACTAA ACTCCAGGTA AAGGATGTTG AGGAAATCAA GAATACTCTT ATTGATGGCT ATGATCATAG TTTCTGGTCC TGCAGCGTCT CAAAACTTGG CTACTCTGGA ACTGCAATAA TCTCACGGAT AAAACCACTC TCAGTTAGAT ATGGTACTGG TCTATCTGGA TCAGATCATG ACATGGAAGG GCGTATTGTA ACTGCTGAAT TCGACTCCTT CTACTTGATA AATACTTACG TCCCTAATTC CGGAGATGGC TTAAAAAGAC TGTCATACAG GATCGAAGAA TGGGATCGAA CCCTCAGCAA CCATATCAAA GAGCTGGAAA AGTCTAAGCC TGTAGTCTTG ACGGGTGATC TAAACTGTGC TCATGAAGAA ATTGACATCT TCAATCCTGC GGGGAACAAA AGGAGTGCTG GTTTTACAAT AGAAGAAAGG CAGTCCTTTG GTGCAAACTT CTTAGACAAG GGATTTGTAG ATACCTTTAG AAAACAACAT CCTGGTGTTG TCGGTTACAC TTATTGGGGT TATCGCCATG GTGGCCGCAA AACCAACAGA GGATGGAGAC TGGACTACTT CTTGGTGTCC GAATCAATTG CAGCCAATGT CCATGATTCT TACATCCTCC CTGATATCAA TGGAAGTGAT CATTGCCCCA TTGGCCTTAT TCTCAAGCTC TGATTTATTC AAAGTTTCAC CATTCCCAGC TTTTTTGGCT AAAAGTCTTT AGTAGCTTTT AGCTAGAGAT TCACAGGTTT TGCTTCTACA GAAAGCTTGG TCATGTAAAA TATGGAATAA TATATCTATC AGTAAACAGG CTCCAAACAA ATTGAGTCTT GTCC 
Length1814
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19187196.. 19190345
Download Sequence
A.thaliana
AGI-codeAT2G41460.1
Descriptionapurinic endonuclease-redox protein
TAIR curator summaryapurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.
Alias[ARP][apurinic endonuclease-redox protein]
Gene coexpression
MR
MR Locus Description
6.48074 Ahg318827 topoisomerase 6 subunit B
16.0624 Ahg950248
16.2481 Ahg491970 AFG1-like ATPase family protein
16.6132 Ahg472744 Amino acid kinase family protein
19.2873 Ahg496478 SGNH hydrolase-type esterase superfamily protein
21 Ahg475314 NAD(P)-linked oxidoreductase superfamily protein
28.6531 Ahg494615 myosin 2
32.1248 Ahg948427
38.5227 Ahg478262 Pectinacetylesterase family protein
39.9375 Ahg483751 transmembrane protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression