Detail



ID : Ahg483267

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483267|fgenesh2_kg.4__2327__AT2G41850.1
Sequence
TCACAAACAT CAAACATTTT CCACCGCATT CCTTTCCCAA CCAAAAAAAA AAAAAAAACA CATATCCTTA CCAATGGCCC GTTGTTCCAA ACTTGTTACC GTTTTCCTAT TATGGGCTCT TTTGATGTTC TCATGGTGCA AAGGTTCAAG AATCAGCCCT AATGGATATG ATCATTCTTA TAAAAGGTTC AAATCCGATA GCTTAATCAA TCGAAAACAG GACATCACGG GCTTGAGAAG TTTTGTAAGA GCCTCTTTGC GGACTCCAAC CACAGTTAGT GTTTCTGATT ATGGAGCTAA AGGAGATGGA AAAACCGATG ACACGCAGGC GTTCGTGAAT GCGTGGAAGA AAGCATGTTC TTCAAATGGA GCTGTTAATC TCCTAGTTCC TAAAGGGAAT ACTTATTTCC TTAAGTCTAT TCAATTAACT GGTCCATGCA GTTCTATCAT TACCGTTCAG ATGTTCGGAA CGTTATCCGC ATCTCAAAAG CGAACGGATT ACAAAGATAT CAGCAAATGG ATAATGTTTG ACGGCGTTAA CAGTCTATCA GTCGATGGCG GCGGCACTGG GGTTGTGGAC GGAAACGGCG AAACGTGGTG GCAAAACTCA TGCAAACGGA ACAAAGCTAA GCCATGCACA AAAGCCCCAA CGGCTCTTAC TTTCTACAAC TCGAAAAGTC TGATAGTGAA AAATCTGAGG GTGAGAAATG CACAGCAGAT TCAGATTTCA ATTGAAAAAA GCTCCAACGT TCAGGTCTCT AATGTCGTGG TAACTGCGCC TGCGGATAGT CCTAACACCG ATGGTATTCA TATCACTAAC ACCCAAAACA TTCGAGTCTC CGACTCCATC ATAGGAACAG GTGATGATTG CATATCTATT GAAAGTGGAT CACAAAATGT TCAAATCAAT GATATAACTT GCGGTCCTGG TCACGGTATC AGTATTGGGA GCCTTGGAGA TGACAATTCA AAGGCTTTTG TCTCAGGCGT GACTGTGGAT GGTGCAAAGC TTTCCGGTAC AGACAATGGA GTAAGAATCA AAACTTACCA GGGAGGGTCA GGAACTGCTA GCAATATTAT ATTTCAAAAC ATTCAGATGG AAAATGTGAA GAATCCGATC ATAATTGACC AAGACTACTG CGACAAGAGC AAATGCACTT CACAGCAATC CGCGGTCCAA GTGAAGAACG TGGTGTACCG AAACATTAGC GGCACTAGCG CGTCGGACAA GGCAATAACG TTTAACTGCA GCAAGAACTA TCCATGCCTA GGAATTGTGC TTGACAAAGT GAACATTAAA GGAGGGAAAG CAACTTGCAC CAATGCCAAT GTGGTTGATA AAGGAGCTGT ATTCCCTCAA TGCAACTCCA CTTAATTAAT TAGATATTTA GATCTATCAA ACACATACAT AGATATATAT ATATATAGTA TAGGAATACA TATATAAACA ATGTTCGTGA GATTTGTAGT TTTATTTGTA TTCTTACATA CTA 
Length1493
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19443378.. 19445832
Download Sequence
A.thaliana
AGI-codeAT2G41850.1
Descriptionpolygalacturonase abscission zone A. thaliana
TAIR curator summaryADPG2.
Alias[ADPG2][PGAZAT][ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2][polygalacturonase abscission zone A. thaliana]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg926124 VQ motif-containing protein
1.73205 Ahg936287 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
2 Ahg904497
3.16228 Ahg491863 Phosphorylase superfamily protein
3.74166 Ahg486294 Adenine nucleotide alpha hydrolases-like superfamily protein
4.89898 Ahg472619 Domain of unknown function (DUF220)
4.89898 Ahg486698
5.2915 Ahg485679 late embryogenesis abundant protein, putative / LEA protein, putative
8.60233 Ahg475742 calmodulin like 23
9.38083 Ahg948802 Serine protease inhibitor, potato inhibitor I-type family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression