Detail



ID : Ahg483350

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483350|fgenesh2_kg.4__2410__AT2G42560.1
Sequence
CAACAGAGAT AAAGAAAACA AAAAGGAAGT GATTGTTAGC ATTAACAATG GCGTCGGAGC AAGCAAAGAG AGAGAACAAG GTGACGGAGA GAGAAGTTCA GGTGGAGAAA GACAGAGTCC CGAAGATGAC GAGTCATTTC GAGTCCATGG CCGAAAAAGG CAAAGATTTC GACACACAGA GGCATCAAAC AGAAGGTGGT GGGACACAGT TCGTGTCACT TTCAGACAAG GGGAGTAACA TGTCGGTTTC TAATGAAGGA GAGGGAGAGA CGAAGATGAA GAGGACTCAG ATGCCTCACT CCGTCGGTAA ATTCGTTACG AGCAGCGAAT CAGGACCGGG GAAGAAGAAG GATGAGAAGG AGCATGAGAA GGCGTCGCTA GAGGACATTC ATGGATATAG AGCCAATGCT CAGCAGAAAT CAATGGATAC TATAAGAGCA GCAGAGGAAA GATATAACAA GGCTAAGGAG AGTTTGAGCC ATGGTGGACA AGAAGGTCGA GGGGGACAAA TGGAGGGAAA AGGGCGGGAA AGTGGTGTCC GTGTTTCTCA CGTTGGGGCT GTTGGTGGTG ACGGAGGAGA GGAAGGAAAA GAGAGTGGTG TTCATGGCTT TCATGGGGAG AAAGCACGAC ATGCTAAGGT TTTGGCTGCC GGAGGTGAGG AGATGAGAGA ACGTGAAGGT AAAGAGTCAG CCGGTGGTGT TGGTGGTCGG AGTGTAAAAG ATACGGTGGC CGAGAAAGGA CGGCAAGCTA AGGGAAGTGT TGGACAAGGT GCTCAGAAAG CCGGAAGCGC TGCCAGTGAG AAAGCTCAGA GAGCTTCGGA GTATGCAACA GAGAAAGGAA AAGAAGCTGG AAATGTGACA GCTGAACAGG CGGCAAGAGC AAAAGACTAT GCTCTGCAGA AAGCTGTTGA AGCTAAAGAG ACTGCGGCGG AGAAAGCTCA GAGAGCTTCC GAGTATATGA AGGAAACAGG AAGCACCGCG GCTGAACAGG CTGCGAGAGC AAAAGACTAC ACTTTGCAGA AAGCTGTGGA AGCTAAAGAT GTTGCAGCTG AGAAAGCTCA GAGAGCTTCA GAGTATATGA CTGAGACAGG AAAACAAGCC GGAAATGTTG CAGCTCAGAA AGGACAAGAG GCGGCTTCAA TGACAGCAAA AGCTAAAGAT TACACTGTTC AGAAAGCCGG TGAAGCAGCT GGGTACGTAA AAGAAACGAC GGTGGAAGGA GGAAAAGGAG CTGCACATTA TGCCGGAGTG GCCGCTGAGA AAGCCGCTGC GGTTGGGTGG ACAGCGGCAC ATTTCACCAC GGAGAAAGTG GTGCAAGGGA CAAAAGCGGT TGCCGGTACA GTGGAAGGTG CGGTGGGGTA TGCAGGGCAT AAGGCTGTGG AAGTAGGATC TAAGGCAGTG GATTTGACTA AGGAGAAAGC TGCAGTGGCT GCTGATACGG TGGTCGGGTA TACGGCGAGG AAGAAAGAGG AAGCTCAACA CAGAGACCAA GAGATGCATC AGGGAGGTGA GGAAGAGAAG CGACCAGGGT TTGTTACAGA AGCAAAGAGA GGCTATGGAG AAGAGTACGG AGGAGAAAGA GGGAGTGAGA AAGATGTCTA TGGCTATGGA CCAAAAGGCA CGGCCGGAGA AGCGAGGAGA GACGTTGGAG AGGCGGAGTA CGGAGGAGGA AGAGGGAGTG AGAAAGATGT CTTCGGATAT GGACCAAAAG GCACGGTCGG AGAATCGAGG AGACACGTTG GAGAGGAATA CGGAGGAGGA AGAGGCAGTG AGAGATATGT CGAAGAAGAA GGGGTTGGAG CGGGAGGGGT GCTTGGGGCA ATCGGCGAGA CTATAGCTGA GATTGCACAG ACGACAAAGA ACATAGTGAT TGGTGATGAT CCTGTGAGGA CACATGAACA TGGAACTACT GATCCTGACT ATATGAGACA TGTACAAGGA CAACGTTGAA AACTAATGTA ATGGTGAAAT GTTTTGTGGG TTTCTGCTTT TCTTAAAAAG GTCTTTTGTT TTTGTATGTA AATAACAAAG AAGCTCTGTT TGTTTGAAGA ATATATGAGT GGTTTCCTTT G 
Length2071
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19769812.. 19772277
Download Sequence
A.thaliana
AGI-codeAT2G42560.1
Descriptionlate embryogenesis abundant domain-containing protein / LEA domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg950383 Auxin efflux carrier family protein
9.48683 Ahg351609 Protein of Unknown Function (DUF239)
9.64365 Ahg929770 Protein kinase superfamily protein
11.9583 Ahg932866
14.1421 Ahg931292 glycine-rich protein
16.2481 Ahg481664 transposable element gene
16.2481 Ahg936672 Protein of unknown function (DUF1216)
17.5499 Ahg920442 Lactoylglutathione lyase / glyoxalase I family protein
18.7617 Ahg945592
19.8997 Ahg338229
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression