| Annotation |
|---|
| Description | jgi|Araly1|483406|fgenesh2_kg.4__2466__AT2G43040.1 |
| Sequence |
TTTTTTTTTT TAACACATTC TTATTATAAA AAAAAGTTTC CTCTCTTTCT AATTTTTAAA AGTTTCTTTC ATCTTCTTCA GATCCGAATT TTCGCCGCAA AATTCGCCAG TGCAGCTTCT TCTCGACCTG ATTCGATCGG CTGTCTGAAG AACATGAAGC CGATGATCGT AGTTGTTGCT TGTTACGGTG GATTGATATT TGGAGGGACG CAGAAATTTT GATGCGGGTT TAGTCTTAAA GGTGAACAAT GCTCGGGAAT CAATCCGCCG ATTTTAGCGA AAACGGGGAT GATGAGATCA TCAGACAGCT TTGTGCAAAT GGGATTTGTA TGAAAACAAC TGAAGTTGAA GCAAAGCTTG ATGAAGGAAA TATCCAAGAA GCTGAATCTT CTTTGAGAGA AGGATTATCT CTCAATTTTG AGGAAGCAAG AGCACTTCTT GGAAGATTGG AATACCAAAG AGGGAATTTA GAAGGCGCAC TTCGTGTCTT TGAAGGTATT GACCTCCAGG CAGCTATCCA GCGGTTACAG GCTTCCGTGC CTCCTGAGAA ACCAGCTACT AAGAAAAACC GTCCCCGTGA ACCGCAGCAA TCAGTTTCTC AGCATGCTGC TAACTTGGTG CTTGAAGCTA TCTACTTGAA AGCCAAATCT CTTCAAAAGC TTGGGAGAAT AACCGAGGCT GCACGCGAAT GCAAGAGTGT TCTTGATTCT GTTGAGAAAA TATTCCAGCA AGGGATACCA GATGCTCAAG TGGATAACAA ACTTCAAGAA ACCGTTAGCC ACGCAGTTGA ACTACTTCCT GCGCTATGGA AAGAATCTGG TGATTATCAA GAAGCAATAT CCGCTTATAG ACGAGCGCTT TTAAGCCAAT GGAATCTTGA TAATGACTGT TGTGCAAGGA TTCAGAAAGA TTTTGCAGTC TTTCTTCTAC ATTCTGGAGT CGAAGCGAGT CCACCGAGTT TAGGTTCTCA GATAGAGGGA TCTTACATAC CTAGAAACAA CTTAGAAGAA GCCATTCTTC TTCTAATGAT TCTTTTAAAG AAATTTAACC TCGGGAAAGC GAAATGGGAT CCGTCTGTGT TTGAGCACCT TACCTTTGCG TTATCTTTAT GTAGTCAGAC CTCGGTTCTT GCCAAGCAAC TTGAAGAAGT AATGCCTGGT GTGTTTAGCC GTATTGAGCG TTGGAACACT TTGGCTCTTT CTTATAGTGC AGCAGGTCAA AACAGTGCTG CAGTTAACCT TCTTAGAAAG TCTCTGCATA AACACGAACA ACCCGATGAT CTTGTGGCGC TTTTGTTAGC TGCTAAGCTT TGCAGTGAAG AGCCTTCTTT AGCTGCAGAA GGTGCGGGTT ACGCGCAGAG AGCGATAAAC AATGCTCAAG GTATGGATGA ACATTTGAAA GGCGTTGGTT TGAGGATGTT AGGACTTTGT TTGGGGAAAC AAGCGAAAGT TCCCACATCG GATTTCGAAA GATCTCGGCT TCAATCAGAA TCATTGAAAG CATTGGATGG AGCTATAGCA TTTGAGCACA ACAATCCTGA TTTGATCTTT GAGTTGGGTG TTCAATATGC TGAGCAACGG AACTTAAAAG CTGCGTCCCG TTACGCCAAA GAGTTCATTG ATGCAACGGG AGGGTCGGTG TTAAAAGGAT GGAGATTTCT CGCGCTTGTT TTGTCGGCTC AACAACGGTT TTCAGAAGCT GAAGTTGTGA CTGATGCTGC TTTAGATGAA ACCGCAAAGT GGGATCAAGG ACCTCTCTTG AGACTTAAAG CAAAGCTAAA AATCTCTCAG TCAAATCCAA CAGAAGCCGT TGAGACTTAT CGTTACCTTC TTGCGTTGGT TCAAGCGCAA AGGAAATCTT TCGGACCTCT CAGAACTCTT TCTCAGATGG AGGAAGACAA AGTGAATGAG TTTGAAGTGT GGCATGGATT AGCATATCTT TACTCAAGCC TTTCGCATTG GAACGACGTA GAAGTCTGTC TAAAAAAGGC AGGCGAGCTG AAGCAATACT CTGCTTCGAT GCTGCACACA GAAGGTCGAA TGTGGGAAGG ACGAAAGGAG TTCAAACCCG CGTTAGCAGC TTTCTTGGAT GGTTTATTAC TAGACGGATC ATCGGTTCCT TGCAAAGTAG CGGTTGGAGC ATTGCTGTCC GAAAGAGGGA AAGATCATCA GCCGACCCTC CCCGTGGCGA GAAGTTTGCT CTCTGATGCA TTGAGGATCG ATCCGACAAA CCGAAAAGCT TGGTATTACT TAGGAATGGT TCATAAATCT GATGGACGTA TAGCTGATGC TACTGATTGC TTCCAAGCTG CTTCTATGCT TGAAGAGTCT GATCCTATTG AAAGCTTCTC AACCATTCTT TAAAA |
| Length | 2365 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 20003845.. 20007240 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G43040.1 |
| Description | tetratricopeptide repeat (TPR)-containing protein |
| TAIR curator summary | encodes a calmodulin-binding protein that is expressed specifically in pollen and is required for pollen development. |
| Alias | [NPG1][no pollen germination 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 50.9608 |
Ahg349225 | |
| 51.4781 |
Ahg494429 | Protein of unknown function (DUF594) |
| 53.2541 |
Ahg324343 | |
| 66.0908 |
Ahg916961 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 68.0882 |
Ahg496303 | atypical CYS HIS rich thioredoxin 5 |
| 86.7064 |
Ahg478161 | Protein of unknown function (DUF1191) |
| 91.225 |
Ahg492992 | Leucine-rich repeat (LRR) family protein |
| 98.3463 |
Ahg325146 | C2H2 and C2HC zinc fingers superfamily protein |
| 99.1665 |
Ahg474144 | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein |
| 100 |
Ahg917240 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|