Detail



ID : Ahg483669

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483669|fgenesh2_kg.4__2729__AT2G45330.2
Sequence
ATGTATAACT CTGGTCTGTT GCTGCGTCTC TGTCGTCTTC GTCTCTGTCG TCTTCGTCTT CCAACTCTGA CTTTGAGCAG CTCTGTCTTC TTCTCGAAAT CGTCTCCTGT TTCTGCTTTC ATGGAAGCTT CAAATCCCAA TTCTTCTAGA AAATCCAATT TCTCTTCCTT CGCTCAGTCC AGTCGAAGAG GAGGAGGCTA TGAGAGAGAT AACGATCGAC GGAGACCTCA GGGACGTGGC GGCGGAGGCG GAAAAGATAG AATCGATGCC CTTGGAAGAC TCTTGACGAG AATATTGCGA CACATGGCTA CTGAGCTGAG ATTGAACATG CGAGGTGATG GTTTTGTTAA AGTTGAAGAT TTACTTAACC TGAATTTGAA AACTTCTGCA AATATTCAAT TGAAGTCACA CACGATTGAT GAAATTAGAG AGGCTGTGAG AAGGGACAAT AAACAACGGT TTAGCCTCAT CGATGAGAAT GGAGAGCTCT TGATTCGCGC TAACCAAGGC CACTCGATCA CGACGGTTGA GTCAGAAAAG TTACTTAAAC CAATACTGTC ACCAGAAGAA GTTCCAGTGT GTGTACATGG AACTTATAGG AAGAATTTGG AATCCATCTT AGCATCGGGC TTAAAGCGCA TGAATAGAAT GCATGTTCAC TTCTCTTGTG GATTACCAAC AGATGGTGAA GTGATTAGTG GCATGAGAAG GAATGTAAAT GTTATCATCT TCCTCGACGT CAAGAAAGCT CTTGCAGATG GGATTGCGTT CTACATTTCA GACAACAAAG TGATTTTGAC TGAAGGCATT GATGGAGTAG TGCCGGTCGA TTACTTCCAG AAGATCGAGT CTTGGCCTGA TCGGCAATCC ATACCTTTCT GATTCATGTA ATTCAACATC ATGCGAAGAT TCACAGGATT CTATGACAAT GATTGTGACG ATTCTTGGTG AACCTTGATT ATGTAATGGT CTCACTGTCT TCAATTGCAC ATATGCCAGT TTATGGAAAC TTTCAAGATT ATGTTGTTTC CGTTG 
Length1035
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20931907.. 20933594
Download Sequence
A.thaliana
AGI-codeAT2G45330.1
DescriptionRNA 2'-phosphotransferase, Tpt1 / KptA family
TAIR curator summary
Alias[emb1067][TRPT][embryo defective 1067][2' tRNA phosphotransferase]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg476410 Homeodomain-like/winged-helix DNA-binding family protein
14.0712 Ahg936303 CAAX amino terminal protease family protein
19.799 Ahg929581 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
22.7596 Ahg929017 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
28.8444 Ahg924243 HSP20-like chaperones superfamily protein
35.623 Ahg920262 Protein of unknown function, DUF647
39.3827 Ahg915424 Disease resistance protein (TIR-NBS-LRR class) family
42.5441 Ahg923398 fucosyltransferase 12
46.2817 Ahg494445 F-box family protein
48.8262 Ahg890818 SNARE associated Golgi protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression