Detail



ID : Ahg483681

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483681|fgenesh2_kg.4__2741__AT2G45440.1
Sequence
TCTCTCGCCG CTTTGTCTTT GTAACAAATC CACATCAATC CATCTTATCG GAATCTTTCC TCATTATGCT CAGCCACCAT TACCAGAGCT CCATTGTTTC AGTTCTCTTT TCAACGATTA TCGGAAGTAT TCACACTATT AGTATCATCA TCGTCGCCAA CTGGTTTTGA TTACCAGCTT CGGTGACGTT TTAATACACG ACGGTCGTGA TTAAGGAGGT TTTGGTAAAT ATCTTTTTGG TATGTTTTCA AAGATGGCTG CTTTGAAAGG TTATGGATTG TGTTCTATGG ACTCTGCTCT ACAATTCCCC TGTCCAAAGT TATCCAATGG CTACAAGAGA AGGAGCCCGA AATGGGTCTC TCCAAAAGCA GCTGTTGTGC CCAATTTTCA TCTCCCAATG CGCAGCTTGG AGGTTAAAAA CAGGACAAAC ACAGATGACA TTAAAGCTCT ACGTGTGATC ACTGCTATCA AAACACCGTA TCTACCTGAT GGAAGATTCG ACCTTGAAGC CTACGATGAC TTAGTGAACA TTCAGATACA AAACGGCGCT GAAGGTGTCA TTGTTGGGGG TACAACTGGT GAAGGACAAT TGATGAGCTG GGACGAACAC ATTATGCTTA TAGGCCATAC CGTTAACTGT TTTGGCGGAA GCATCAAAGT CATTGGAAAC ACTGGAAGCA ATTCGACTAG AGAAGCAATC CACGCAACTG AACAAGGATT CGCTGTTGGA ATGCACGCTG CTCTTCACAT AAACCCTTAC TATGGCAAGA CTTCGATTGA GGGTCTGATT GCACATTTCC AATCTGTTCT TCATATGGGA CCGACGATTA TATACAATGT GCCTGGTCGA ACAGGGCAAG ATATACCGCC TCGTGCCATC TTCAAACTTT CTCAGAATCC TAATTTAGCC GGTGTGAAGG AATGTGTTGG GAACAAGCGG GTCGAAGAGT ACACTGAGAA TGGGGTTGTT GTGTGGAGTG GGAATGATGA TGAGTGTCAT GATTCAAGAT GGGATTATGG AGCAACAGGA GTTATATCGG TTACTAGTAA TTTAGTGCCA GGTTTGATGA GGAAATTGAT GTTTGAAGGA AGGAATTCAT CTTTGAACTC AAAGCTACTA CCTTTAATGG CTTGGCTATT CCACGAGCCA AACCCGATTG GAATTAACAC TGCTTTGGCT CAGCTTGGAG TGTCGAGGCC AGTTTTTAGG TTACCGTATG TACCATTGCC ACTGTCTAAG AGGCTTGAGT TTGTGAAACT GGTGAAGGAG ATTGGACGAG AGCATTTTGT TGGTGAGAAA GATGTTCAGG CTCTTGATGA CGATGATTTT ATCCTTATTG GTCGATATTA GCATTACCTT TTTTTTTCGA ATTTTTGGTT TCTTTTGTTT GGTGTTAAAA AAGAAGAGAC GGTTCTATAC TTCTATCTGT TTTATGTAGC TGATGAATGA AAACTCACGG AATGATTTCA TCATATTTCT TATCATGTTT TGGTC 
Length1495
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20997936.. 20999813
Download Sequence
A.thaliana
AGI-codeAT2G45440.1
Descriptiondihydrodipicolinate synthase
TAIR curator summaryEncodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.
Alias[DHDPS2][dihydrodipicolinate synthase 2]
Gene coexpression
MR
MR Locus Description
24.0208 Ahg939446 transducin family protein / WD-40 repeat family protein
24.6577 Ahg493541 Inosine triphosphate pyrophosphatase family protein
28.178 Ahg941792 Alanyl-tRNA synthetase, class IIc
34.2783 Ahg312946 Alba DNA/RNA-binding protein
35.4965 Ahg920910 pfkB-like carbohydrate kinase family protein
39.7492 Ahg924040 SC35-like splicing factor 33
43.7035 Ahg311783 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
59.2706 Ahg330245 acetyl-CoA synthetase
59.607 Ahg909381 tubulin-tyrosine ligases;tubulin-tyrosine ligases
65.4981 Ahg944731 ascorbate peroxidase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression