Detail



ID : Ahg483735

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483735|fgenesh2_kg.4__2795__AT2G45950.1
Sequence
AATTCCTAAA TTTAGTCCAC TTCCACATTG CTTGGCCGCA GCCGCCGCCG CCGTCCGCCG TCGATATCCA CCACCAGATT TTAAATCCTC CGCCGGAAGT CCACCTTCAT TACCCAATAT CTGTTATAAG TTTGGTGGAT GGAGTTGCTG GATATTGCTT AAGATCGCCA TCTGACTTCA AATCTCATAG ACCTGAGTAC TTTGCTACTT GGCGTATTTA TTTTATCTGG GTGGCCATTT TTGTCCTGAA AAGCTTCAGG ATGTAAGGAA AACAGAGACT TTGTATAGGA GCTGAAGGTG TAATAATAAT TATAATTGCA GAAGACTGCG TCATCAAATC TATTATCAAT GTCAGAAGGT GATTTGGCCG TCATGAAACC AGAGACCATG AAGTCCTACA TCTGGCTTCA AACTGCTGAT GGTTCAATCC AGCAAGTGGA ACAAGAGGTT GCAATGTTCT GTCCCATGAT ATGTCAAGAG GTAATACAAA AGGGTGTTGG ATCTTCTAAG AATCATGCAA TATCGCTTCC ACAACGAGTT AATCCAGCTA TGTTCAGCTT GATTCTTGAT TATTGCAGAT TTCATCAACT GCCTGGACGT TCAAATAAGG AACGAAAAAC TTATGATGAA AGATTCATCA GAATGGACAC AAAAAGGCTC TGTGAGTTGA CCTCAGCCGC TGATAGTTTG CAGCTGAAGC CTTTGGTTGA TCTTACTAGT TGCGCACTTG CAAGAATCAT TGAAGGAAAA ACCCCTGAGG AGATACGAGA AATATTTCAT TTGCCTGATG ACCTTACTGA GGAGGAGAAA TTAGAGCCTC TGAAGAACAC AATGGATGAT CCACGGATTC GACTACTGAA TAGATTATAT GCAAAGAAAA GAAAGGAGCT GAAAGAAAGA GAGAGATTGA AGAATGTTGA GGTTGAAGAA CACGTGGACG AACGTTCTGT GGATGACCTG TTATCATTTA TTAATGGCAG AGATTCCAAG GTGGTAAAGA TGTCAAAGGG AAAAAAGAAG AAGAAGAAAA AGAAGGATCA GAAGATTGTT TCTTCAAATG ACATTCATGA CAAGGAATCA CATGATCTTC ATTCCAAACA ACAATGTGTT GAAGAGACTG GGTCCAGCAT GAGAGAGGTA CCCAACTTAC CTAGTGCAGA AGATGACATT TCTACGCCAA AGGCCGGGTC TGAAGATGAA GATATAGACG ATGAAATCGA TCCAGCCATG AGGGAATTGC TTGATAGAGA GGTAGAAGAT TTTGCTCAAA GACTGAACTC CAATTGGGTT CGGTCGCTAG GACAAGAAAG AAGGTCTGTA CACTTCTCCA TAAATGGCAA CGGGACTACA AGACGGCATA CAGGTCAATC TCCATGACAC GATTGGAGCT GAAAATGGAA CAGTTTTGGT TATGTGAGCA AATAGAGAGA GAGAGAATGG TTCACCAGTC AGTCACCACC GGCGTTTGAT GCGTGTCCTC ATGTAACAGT TTTGATTTTG ATTGTTTTAC TTTCTTCTAG TGATCCATCC TTTTCTTTGT AAAACCACGT TTCTACGTTA GCTTTTTTTT TGTGTTTAGG TTCCATTGTT TTAGCAACAG AAATTTATCA TACACACACT CTGATATCAC CA 
Length1632
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21199011.. 21201851
Download Sequence
A.thaliana
AGI-codeAT2G45950.2
DescriptionSKP1-like 20
TAIR curator summary
Alias[ASK20][SK20][SKP1-like 20]
Gene coexpression
MR
MR Locus Description
38.833 Ahg478672 myb-like HTH transcriptional regulator family protein
44.9444 Ahg930999 Ribosomal protein S12/S23 family protein
51.8073 Ahg476957 Chaperone DnaJ-domain superfamily protein
75.1133 Ahg940129 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
82.1036 Ahg935085 RNA-binding (RRM/RBD/RNP motifs) family protein
88.8594 Ahg350042 glucuronidase 2
90 Ahg328832 Leucine-rich repeat transmembrane protein kinase family protein
92.9516 Ahg471019
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression