| Annotation |
|---|
| Description | jgi|Araly1|483883|fgenesh2_kg.4__2943__AT2G47070.1 |
| Sequence |
TCTATCTCTC TCTCTCACTC TTTGTCTCTC CCCTAACCTT TTTTTGTACT AGCATAAGCA TTACCATACA TACTCTTCTC CACCACGCCA CAAACGCAGA TTCACATCTT CTTCTTCTTG TTCATAGCAT CTCCATCACT TCTGGGGTTA CTTTGTTGCG TTGAAGAGCT AGCTTTAGGA ATCTATCAAG AGATTTCCAG AGGGGCATCT GTGTTTGGTT TAATTGGATC TCTCCTCTTT AGGTTTCTGG GCAAGAGTAA TTGAGATTGA TCAGGACCAA AGTTTGTGTT TTTTTTTTTC TTTCGATCTA CAAAGATCAA TTTGGCTTTT GTTGTAGTAG AGAAAACAAC TATCTCTGTG AGAATGGAAG GTGAGGAGGC TCAACATTTC TATGGGTTTA GAGCTGTGGA TCTAAGGTCC GTAGGTAAGA CAAGTGTGGA GTGGGATTTG AATGATTGGA AATGGGATGG TGATCTCTTT CTCGCTACTC AATTGAATCC TGCCGCCAGC GAAACTACGG GGCGTCAGCT TTTCCCTCTA GGAAACTCGT CCAATAGCTC CTCCTCCTGC TCTGATGAAG GGAATAATAC TAATATGGTT GAGAAGAAGA GGAGAGCTGT TGCCATACAA GGAGACAGTA ATGCTGCTGG TGGTCTTACT TTGAAGCTTG GAGACAATGC TTGTCATCTT AATGCTGCCA AGAAGACCAA ATTCGGAGCA GCCGTTTGTC AGGTGGAAAA CTGTGAAGCT GATCTTAGTA AAGTTAAGGA TTATCATAGA CGTCATAAGG TCTGTGAGAT GCATTCCAAG GCTACTAGTG CCATTGTCGG AGGTATCTTG CAGCGCTTTT GTCAGCAATG TAGTAGGTTC CATCTTCTTC AGGAGTTTGA TGAAGGAAAG AGAAGTTGTC GTAGACGTTT GGCTGGGCAT AATAAACGTA GGAGGAAAAC AAATCCTGAA CCTGGCGCTA ACGGGAATCC TAGTGATGAT CAGTCAAGCA ACTATCTCTT GATTAGTCTC TTGAAGATAC TCTCCAATAT GCATAACCAT ACCGGTGATC AAGATTTGAT GTCTCATCTT CTGAAGAGCC TCGTAAGCCA TGCTGGTGAA CAGTTAGGGA AAAACTTAGT TGAACTTCTT CTACAAGGAG GATCTCAAGG TTCCTTAAAT ATTGGAAACT CGGCTTTGCT TGGAATTGAG CAAGCTCCTC AAGAGGATTT AAAGCAACTT TCGGTAAACG TACCTCGGCA AGATGGGACA GCTACCGAGA CCAGATCAGA AAAACAAGTC AAAATGAATG ATTTTGATTT GAATGATATT TATATAGACT CAGATGACAC AGATATCGAA AGATCTCCTC CTCCAACCAA TCCAGCAACC AGTTCTCTTG ATTATCCTTC ATGGATACAT CAGTCTAGTC CACCTCAGAC AAGTAGGAAT TCAGATTCAG CATCTGACCA GTCACCGTCA AGTTCCAGTG AAGATGCTCA GATGCGCACA GGCCGGATTG TGTTCAAACT ATTTGGGAAA GAGCCAAATG AATTTCCTAT TGTCTTGCGT GGACAGATTC TTGACTGGTT ATCGCATAGT CCAACTGACA TGGAGAGCTA CATTAGGCCT GGCTGTATCG TATTGACCAT CTATCTTCGT CAAGCTGAAA CTGCTTGGGA AGAGCTCTCA GACGATCTGG GTTTTAGCTT AAGGAAGCTT CTAGATCTCT CTGATGATCC CTTGTGGACA ACTGGATGGA TTTATGTTAG GGTGCAAAAC CAACTTGCAT TTGTATATAA CGGTCAGGTT GTTGTTGACA CTTCATTGCC TATAAAAAGT CGTGATTATA GCCACATCAT TAACGTTAAA CCGCTTGCTA TAGCTGCAAC GGGGAAGGCT CAATTTACAG TTAAAGGCAT TAATCTCCGT CGACGTGGCA CAAGGTTGCT TTGTGCTGTT GAAGGAAAAT ACTTGATTCA GGAAACAACA CACGACTCGA CGACCGGGGA GAATGATGAT CTCAAGGAGA ATAATGAGAT TGTTGAGTGT GTAAACTTTT CTTGTGATAT GCCTATAACG AGTGGTCGAG GATATATGGA GATTGAAGAC CAAGGACTCA GCAGCAGCTT CTTCCCTTTC TTAGTTGTTG AAGATGATGA TGTTTGTTCT GAAATCCGTA TACTTGAAAC CACATTAGAG TTCACTGGAA CTGATTCTGC TAAGCAAGCT ATGGATTTCA TTCATGAAAT CGGTTGGCTT CTTCACAGAA GTAAGCTTGG GGAATCAGAC CCAAATCCAG ACGTTTTCCC ATTAATACGC TTCCAGTGGC TAATCGAGTT CTCAATGGAT CGAGAGTGGT GCGCTGTGAT CAGAAAGCTA TTAAACATGT TCTTTGATGG AGCTGTTGGT GAATTTTCTT CCTCCTCTAA TGCCACACTA TCAGAACTGT GCCTTCTTCA CAGAGCCGTG AGGAAAAACT CTAAGCCTAT GGTCGAAATG CTCTTGAGAT ATGTTCCCAA GCAACAAAGA AACAGCTTGT TTAGACCCGA TGCTGCTGGT CCAGCCGGCT TAACACCTCT TCATATTGCA GCCGGTAAAG ACGGTTCAGA AGATGTGTTG GATGCGCTAA CAGAAGATCC TGCAATGGTG GGGATTGAAG CGTGGAAGAC ATCTCGAGAC AGCACAGGCT TCACACCAGA AGACTACGCA CGCTTACGCG GTCACTTCTC ATACATCCAC TTGATTCAAC GCAAGATCAA TAAAAAGTCA ACAACTGAAG ATCATGTTGT GGTCAACATC CCAGTTTCTT TCTCAGACAG AGAGCAGAAA GAACCAAAAT CAGGTCCGAT GGCTTCAGCC TTGGAGATTA ACCAGCTTCC ATGCAAGCTC TGTGACCATA AACTGGTGTA TGGGACAACA CGCAGGTCTG TAGCGTACAG ACCAGCTATG TTGTCAATGG TGGCGATTGC TGCGGTTTGC GTCTGTGTGG CACTTCTGTT TAAGAGTTGC CCGGAAGTGC TCTATGTGTT TCAACCGTTC AGGTGGGAGT TATTGGACTA TGGAACAAGC TGAGTGTAAG TCTACTTTGA AAGATCTTCT AAGATATATA TGAATGTTAC TTATATAAAA CCCATAGAGG TGTGATTTCT ATATGTAACT ATATGAGTAT AAGATATAGA GACATGTTGG AGTTAGAAGA TTGTTGTTGT TGTTGTGTAA AAGCCTTCCC TTTCTCTCTG GAGATGTTGA TGATTAGTAT ATTTTTTGTT TGACAGAATA ATTTGTTTCT TATTGTAATT TAACAATGGA GATGTTCTTC TTTTTAAGTT TCCCTTGGAT TCACACTTTT G |
| Length | 3341 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 21704713.. 21709007 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G47070.1 |
| Description | squamosa promoter binding protein-like 1 |
| TAIR curator summary | member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA. |
| Alias | [SPL1][squamosa promoter binding protein-like 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg477306 | K+ uptake transporter 3 |
| 3.87298 |
Ahg491794 | Alkaline-phosphatase-like family protein |
| 4.47214 |
Ahg494129 | Rad23 UV excision repair protein family |
| 6.32456 |
Ahg929657 | |
| 8.12404 |
Ahg495040 | methionine S-methyltransferase |
| 8.48528 |
Ahg942084 | |
| 9.16515 |
Ahg483953 | RING/U-box superfamily protein |
| 9.8995 |
Ahg481915 | transducin family protein / WD-40 repeat family protein |
| 10.4881 |
Ahg486210 | adenylosuccinate synthase |
| 12.9615 |
Ahg922237 | Adaptin family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|