Detail



ID : Ahg484116

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484116|fgenesh2_kg.5__108__AT2G01940.1
Sequence
TATGAGAGAG AAATAGGTTT TTTGATGAAG AGTCAAAATA GCAAAGAGAG CTAGAGTGAG AGAGACCCAA AAAAATTAAA AAGCTTTCAT CATATTAACA TAAGAGAACT TTGAAGAGCC TACCAAAAAG TTTGAAAAGC CTTTGTTGCA GAAAGCTTAA GAGAGCTTTT TCTCTCCCCC TATATCTCTA TTTCTCTTTA TTACCTTTCC TCTTCTTTGT AAAGCTGAAC CCTCCACTAT CTCTTCTTCT TTCATAATTT TTTTTTGTCT CTGGGTCTTG TTGTTTCATC AAATCAATCT CTAGTATCCA AATACAATAA AGTCAAAAAA GAGAGATCAA GAAAGTATAG TAATTGATGA GAACAGATCA AGTGATGTTG TCCAACAAGA ACACAAACAC ATGTTGTGTG GTTTCTTCTT CTTCTTCTGA TCCTTTCCTC TCCTCATCAG AAAATGGGGT CACCACCACA AACACATCCA CTCAGAAGAG GAAAAGAAGA CCTGCAGGTA CACCAGATCC AGATGCAGAA GTTGTGTCTT TATCACCAAG AACTCTTCTT GAATCAGACA GATACATATG TGAAATCTGT AACCAAGGGT TTCAAAGAGA CCAAAATCTC CAGATGCATC GAAGACGTCA CAAAGTTCCA TGGAAGCTTC TTAAAAGAGA CAACAACATA GAGGTGAAGA AACGAGTCTA TGTTTGCCCT GAACCCACTT GTCTTCACCA TGATCCTTGT CATGCTCTCG GAGATCTTGT CGGTATCAAA AAACATTTCA GAAGAAAACA TAGTAACCAT AAGCAATGGG TTTGTGAGAG ATGCTCTAAA GGTTATGCTG TTCAATCTGA TTACAAAGCT CATCTCAAAA CTTGTGGTAC TAGAGGACAT TCTTGTGACT GTGGTCGTGT CTTCTCCAGG GTGGAGAGTT TTATTGAACA TCAAGATAAC TGTTCCGTAC GGAGAGTTCA CCGTGAACCG CCTCAACCGC CACAAACCGC GGTAGCAGTC CCGGCATGCT CCTCTAGAAC CGCCTCAACC GTCAGCACTC CGTCTAGTGA AACCAATTAC GGCTGTGCAG TTGCGGTTGC GACTCCTCTA CCTCTAGAAG GCCGTCCAAT TCATCAGAGA ATCTCATCTT CAATTCTCAC CAACTCATCA AACAATCTCA ACCTAGAACT CCAGCTTCTT CCACTATCAT CCAATCAAAA CCCTAATCAA GAAAACCAAC AACAAAAAGT TAAAGAACCA TCTCATCATC ATAATCAGAA TCATGATACC ACAAACTTAA ACCTTTCCAT TGCACCATCA TCATCATATC AACATTACAA CAACTTTGAT CGTATAAAAG AGATTATGGC GAGCGAGCAA ATCATGCAGA TGGCGATGAA GGAGAAATCT TATGCAGAGG AAGCTAAAAG AGAAGCGAAG AGGCAACGAG AGATAGCGGA AAACGAGTTT GCAAATGCTA AAAAGATAAG GCAAAAAGCA CAAGCTGAAC TCGAGAGAGC TAAGTTTTTA AAGGAACAAT CGATGAAGAA GATAAGCTCA ACGATCATGC AAGTCACTTG TCAAACTTGT AAAGGACAGT TTCAAGCAGT TGCGGTTCCG GCGGCTGCGG CTGACGAAAC GTCTCTTGTC GTGAGTTACA TGTCGTCAGC GAATACCGAC GGAGAGTTGG AAAATGGATT TTAAGTAAAA CAAAAAAAAA GCATAAGATA TTTAAATTAA GGTAACTTAA ATATATTTTT GTGTATTACT TACCCGATCG GGTTGTGTTA ATTTTTTGAA TTACCATATA TTATGTCATG GTTGTCATAT AGTTGTTAAT CTTTGGTCCA ACAGTATTA 
Length1849
Protein Sequence
Protein Residue
Map Locationscaffold_5: 534703.. 537470
Download Sequence
A.thaliana
AGI-codeAT2G01940.3
DescriptionC2H2-like zinc finger protein
TAIR curator summaryMay be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.
Alias[ATIDD15][SGR5][ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15][SHOOT GRAVITROPISM 5]
Gene coexpression
MR
MR Locus Description
56.9737 Ahg945462
74.4849 Ahg485821 alpha/beta-Hydrolases superfamily protein
88.5042 Ahg907271
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression