Detail



ID : Ahg484300

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484300|fgenesh2_kg.5__292__AT2G03880.1
Sequence
GTGGATATGA TGAAGTCAGT AACGTCAACG ATCAAACTCT TTAGACCAGT CCTCACGTTA CGTTGTTCTT ATAGCTCCAC CGATCAAACT CTTCTTCTTA ACGAATTTAC CAGACTCTGT TACCAGAAAG ACCTTCCCAA AGCTATGAAA GCAATGGATT CGTTACAAAG CCATGGTCTT TGGGCAGACT CTGCAACTTA TTCTGAGCTT ATCAAATGTT GCTTGTCTCA TAGAGCTGTT CACGAAGGGA ACCTCATTTG TCGTCATTTA TACTTCAATG GTCATCAACC AATGATGTTT CTGGTTAATG TATTGATCAA TATGTATGTA AAATTCAATC TTTTGAATGA TGCTCACCAA CTGTTCGACG AAATGCCTCA AAGGAATGTT ATTTCTTGGA CTACGATGAT TTCGGCATAT TCTAAGTGTA AGATTCATCA GAAGGCTTTG GAGCTTTTGG TTTTGATGTT GAGAGATGGT GTGAGGCCTA ATGTGTATAC TTATTCCTCT GTTTTGAGAG CTTGTAATGG TATGTCTGAT GTTAGAATGC TTCATTGTGG GATTATTAAG GAGGGTTTAG AGTCTGATGT TTATGTTAGG AGTGCTTTGA TTGATGTGTT TGCTAAACTG GGTGAGCCGG AGGATGCTCT TTTGGTTTTC GATGAAATGG TTACGGGTGA TGCGATTGTT TGGAACTCGA TTATTGGTGG GTTTGCTCAG AATAGTAGAA GCGATGTAGC TTTGGAGCTT TTTAAGAGGA TGAAAAGAGC TGGTTTCATT GCGGAGCAGG CTACGTTGAC TAGCGTATTG AGGGCTTGTA CTGGTTTAGC TCTGTTGGAG CTTGGGATGC AAGCTCATGT TCATATCGTG AAATATGACC AAGACTTGAT ACTCAACAAC GCACTAGTGG ACATGTATTG CAAATGTGGG AGCTTGGATG ATGCTCGCCG TGTGTTCAAC CAGATGAAGG AGAGAGATGT GATTACATGG AGCACTATGA TTTCAGGGTT AGCACAAAAT GGTTATAGCC AAGAGGCACT GAAGTTGTTT GAGCTTATGA AATCATCTGC GACGAAGCCA AACTACATTA CGATTGTCGG GGTTCTCTTT GCTTGCAGCC ACGCAGGGCT CCTGGAAGAT GGTTGGTACT ACTTCAGATC AATGAAGAAA CTTTATGGAA TCAATCCAGG GAGGGAACAT TATGGTTGCA TGATTGATCT GCTAGGAAAA GCTGGAAAGC TCGACGATGC AGTGAAGCTG TTAAATGAAA TGGAGTGTGA GCCAGATGCT GTGACATGGA GAACTTTGCT TGGTGCTTGT AGAGTTCAAA GAAACATGGT GCTAGCGGAA TATGCAGCTA AAAAGGTTAT AGCACTCGAT CCCGAGGATG CAGGTACTTA CACAGTGTTG TCTAACATAT ATGCAAACTC TCAGAAATGG GACAGTGTTG AAGAAATTCG AAAGCGAATG AGAGACATAG GAATCAAGAA AGAACCTGGA TGCAGCTGGA TCGAAGTAAA CAAACAGATT CATGCTTTTA TCATTGGAGA CGAATCTCAC CCACAGATAG TTGAAGTCAG TAAGAAACTG AACCAACTGA TACATAGACT CATTGGTATT GGTTATGTTC CTGAAACAAA CTTTGTGCTA CAAGATCTTG AAGGAGAACA AATGGAAGAT TCACTTAGAC ATCACAGTGA GAAACTAGCT TTAGCCTTTG GCTTGATGAC ATTACCTAGT GAGAAAGTCA TTAGGATCAG AAAGAATTTG AGAATATGTG GGGATTGTCA TGTGTTTTGC AAGCTCGCAT CGAAGCTTGA AAACCGCAAT ATCGTTATAA GAGATCCGAT CCGTTACCAT CATTTTCAGG ATGGCAAATG TTCTTGTGGT GACTATTGGT AACAATCATA TGTCTTTAGG TTACAATGAA ACAGTGTAAG ATGGTTTAGT AGATTGTTTC TCTGTAAGTT TTCTTCATCA AATTTTTGAT TAGTGAATCA TGTTTGCTTG TGAAGATGCT CATTGATTTG CCAAATTTTT TGATAGGATT CTGTAACATT TGCAAAATTG AATATTTATG ATTAAATT 
Length2088
Protein Sequence
Protein Residue
Map Locationscaffold_5: 1959656.. 1961743
Download Sequence
A.thaliana
AGI-codeAT2G03880.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias[REME1][required for efficiency of mitochondrial editing 1]
Gene coexpression
MR
MR Locus Description
56.8243 Ahg916047
59.9333 Ahg932510
80.4363 Ahg931060
98.0714 Ahg900620
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression