Detail



ID : Ahg484305

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484305|fgenesh2_kg.5__297__AT2G04030.1
Sequence
TCACTCTCCT TAAACCTTTT ATAGGGTTTT TAGGTTACTC TTTGTTCAAC TACTACTACT ACAAACTCTT CTCTCTTTAG AGATTGAGAG ATTTGACAAA TCTCAAATCT TTCCTTCACA ACTTTCAATC TAATGGCTCC TGCTTTGAGT AGAAGTCTCT ACACAACTCC TTTGACTTCA GTTCCAATCA CTCCTCTCTC TTCTCGTCTC TCTCATCTGC GAAGCTCGTT TCTGCCTCGC GGCGGCGCTC TAAGAACCGA CCTTTCGTGT AGTTGGAATC TCGAGAAAAG ATGTAATCGA TTCGCCGTGA AGTGTGACGC CGCCGTGGCG GAGAAAGAAA CGACTGAAGA AGGGTCTGGT GAGAAGTTTG AGTACCAAGC TGAGGTTAGT AGATTGTTGG ATTTGATTGT TCATAGCTTA TACAGTCACA AGGAGGTATT TCTCAGAGAG CTTGTGAGTA ATGCAAGTGA TGCTTTGGAT AAGCTGAGGT TCTTGAGTGT AACAGAGCCT TCTTTGCTTG GAGATGGTGG AGATCTTGAG ATTAGGATTA AGCCTGATCC TGATAACGGC ACTATTACCA TTACCGATAC TGGTATTGGA ATGACAAAGG AAGAACTTAT AGACTGTCTT GGAACTATTG CTCAAAGTGG TACTTCGAAA TTCTTGAAGG CTCTTAAGGA AAACAAAGAC CTTGGTGCTG ACAACGGTTT GATCGGACAG TTTGGTGTTG GGTTTTACTC TGCTTTCTTA GTTGCTGAAA AGGTTGTTGT GTCTACCAAA AGCCCCAAGT CTGACAAGCA ATATGTTTGG GAATCGGTTG CCGATAGTAG CTCGTACCTG ATCAGAGAAG AAACAGACCC TGAAAACATT CTACGCCGTG GAACACAAAT CACCTTGTAT CTGAGGGAGG ATGATAAATA TGAATTTGCG GAGTCTACGA GGATCAAGAA CCTTGTGAAG AATTACTCTC AGTTCGTTGG GTTTCCTATC TATACATGGC AGGAGAAATC AAGGACTATA GAGGTTGAAG AGGAAGAACC AGCTAAGGAA GGAGAAGAGG GTGAGCCAAA GAAAAAGAAG ACCACTAAAA CTGAGAAGTA TTGGGATTGG GAACTAGCCA ATGAGACAAA ACCGCTATGG ATGCGCAATT CGAAGGAAGT GGAAAAAGGA GAGTACAATG AGTTCTACAA AAAGGCTTTC AATGAGTTCT TGGATCCACT TGCTCACACA CACTTCACAA CTGAGGGTGA GGTTGAGTTC AGGAGTATTT TGTACATCCC TGGGATGGGT CCTCTTAACA ATGAGGATGT TACAAACCCG AAAACAAAGA ACATTCGTCT CTACGTGAAG CGTGTGTTTA TCTCTGACGA TTTTGATGGA GAGCTTTTCC CGAGATATTT GAGCTTTGTG AAGGGAGTAG TGGACTCTGA TGATCTTCCT CTTAATGTTT CCCGTGAAAT TCTCCAAGAA AGCAGAATTG TAAGAATCAT GAGAAAGAGG CTCATAAGGA AAACCTTTGA CATGATACAA GAAATCTCTG AAAGTGAAAA CAAAGAGGAT TACAAGAAAT TCTGGGAGAA CTTTGGTAGG TTCCTTAAAT TGGGTTGTAT TGAAGACACC GGTAACCACA AGCGTATTAC ACCGCTACTC AGATTCTACA GTTCCAAGAA TGAAGAAGAA TTGACAAGCT TGGATGATTA TATCGAGAAC ATGGGAGAGA ACCAAAAGGC GATCTACTAC CTTGCCACTG ATAGTCTTAA AAGTGCCAAG TCTGCCCCTT TCTTGGAGAA ATTAATCCAA AAAGATATCG AGGTTCTATA CTTGGTTGAA CCAATCGATG AAGTTGCGAT TCAGAATTTG CAAACCTACA AAGAAAAGAA ATTCGTTGAT ATCAGCAAAG AAGATTTGGA ACTCGGAGAT GAAGATGAAG TAAAGGACAG GGAAGCTAAA CAAGAGTTTA ACCTTCTCTG TGACTGGATA AAACAGCAGC TCGGTGACAA AGTTGCAAAA GTCCAAGTCT CAAATCGTTT GAGCTCTTCT CCTTGTGTGC TTGTTTCAGG CAAATTCGGG TGGTCAGCTA ATATGGAAAG GCTAATGAAG GCACAGGCTC TTGGAGACAC TTCAAGCCTG GAGTTCATGA GAGGTAGGAG AATACTAGAG ATCAATCCAG ATCATCCCAT CATCAAAGAC TTGAACGCTG CTTGCAAGAA TGCACCAGAG AGCACTGAAG CAACAAGAGT GGTCGATCTC TTGTATGACA CTGCTATAAT CTCAAGTGGA TTCACTCCTG ATAGCCCGGC CGAGCTCGGG AACAAGATTT ATGAGATGAT GGCAATGGCG GTTGGAGGAA GATGGGGCAG AGTTGAAGAA GAAGAAGAAA GCTCGACTGT GAATGAAGGA GATGACAAAA GTGGAGAAAC AGAGGTAGTT GAACCATCTG AAGTTAGGGC AGAGAGTGAT CCTTGGCAAG ATTGATCCTT TTTTACCTTC TTTTGTTTCC AGTGAATTTT TTTGACACAA AACGCTTTAT CTTCTTCATT AGCAGTATCA TGGGCCTAAC CGCCTAAGGA AAGCCCATAA TTAAATCATG AACGAGATTT ATCCAATATT TGTAGTTTGT TTTTGGATAA TTAAAATAAT TTTAGAGAAA TTACACAAAA AAAG 
Length2664
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2015038.. 2019338
Download Sequence
A.thaliana
AGI-codeAT2G04030.1
DescriptionChaperone protein htpG family protein
TAIR curator summaryEncodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.
Alias[AtHsp90.5][AtHsp90C][CR88][EMB1956][Hsp88.1][HSP90.5][HEAT SHOCK PROTEIN 90.5][EMBRYO DEFECTIVE 1956][HEAT SHOCK PROTEIN 88.1]
Gene coexpression
MR
MR Locus Description
2 Ahg492423 chloroplast heat shock protein 70-1
3.74166 Ahg470457 Nucleolar GTP-binding protein
4.24264 Ahg492088 Ribosomal protein L14
4.3589 Ahg471686 chaperonin 10
7.48331 Ahg474037 nucleolin like 1
8.60233 Ahg476596 NAP1-related protein 1
10.247 Ahg476044 fructokinase-like 2
11.8743 Ahg481708 chaperonin-60alpha
12.49 Ahg930498 heat shock protein 60
13.9642 Ahg481268 DNA/RNA polymerases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression