| Annotation |
|---|
| Description | jgi|Araly1|484313|fgenesh2_kg.5__305__AT3G25570.1 |
| Sequence |
GAATCCTTTT CTTGACTTAG TTTTGGTTTT TAATTGCTCT GTCTTTCTTG ACAGGTGAAT GAGAAATGGA GACTAAAGGT GGTAAAAAGA AGTCTAGTAA TAGTAGTAGT AGTAGTAGTA ACAGTCTTTT CTACGAAGCT CCTCTTGGAT ACATCATTGA AGACGTTAGA CCTAACGGTG GAATCAAGAA ATTCAGATCT GCTGCTTACT CAAACATCAC TCGCAAACCA TCCTGATTTT CTTCAATACG TTTTCCTCCT AACCACTTAC TAACTGTGGT TGATCAACGT TCGCGATAAA TCTTCGTTCT TTCTTGTTTT GTTCTCCTTC AAAACTCATT TTTTGACGGC CTCTTCGTCT TTTGGAAAAT GGCGGTCTCT GCTATTGGTT TCGAAGGATT TGAGAAAAGG CTCGAAATTT CATTCTTTGA GCCTAGTGTC TTTCTTGATC CCAAAGGAAA TGGTCTTCGT GCTCTTACTA AATCCCAGTT AGATGAGATC TTGACTCCAG CAGAATGCAC AATTGTTTCC TCTCTCTCAA ACTCTTTGGT CGACTCTTAC GTGCTCTCTG AATCTAGCCT CTTTGTCTAT CCTTACAAGA TCATCATCAA AACATGCGGG ACTACGAAGC TTCTCTTTTC GATCCCGCAT ATCCTTAGTC TGGCTGATTC ACTTTGCCTT ACTGTCAAAT CTGTCCGCTA CACTCGTGGT AGCTTCATTT TCCCGGGAGC TCAATCTTAC CCTCACCGTA GCTTCTCAGA GGAAGTTGCT TTACTTGATG GCTATTTTGG TAAGCTCAAT GCAGGAAGCA AAGCTTTTGT CATGGGAGGG TCAGATAATA ACCCTCAGAG ATGGCATGTC TACTCTGCTT CTTCTGCTTA TGAATCTGAT GTGGCTTGTG ACAAACCCAA AAAAGCTTCG GTGTTCTTTA AAACCAATTC GGTTTCAGCT TCTGAGATGA CTATTAGCTC TGGGATTAGA AACATCCTTC CAGCCTCTGA AATCTGTGAT TTTAACTTTG ATCCTTGCGG TTACTCGATG AATTCAGTTG AAGGAGATGC AGTTTCAACC ATCCATGTGA CTCCGGAAGA CGGTTTTAGC TATGCAAGCT TTGAAACAGA GTTGGTGGAT AGGGTTCTGG TTTGTTTTGA ACCAGAAGAA TTCTCTGTAG CGGTGCATGC CAATCTTGGA ACCGAGCTAT TGGCGTGTGA TTGTATAGTT GATGTGAAGG GATACTTGAG CCAAGAGAGA GGACTAGAGG AGCTTGGACT TGGAGGTTCG GTTGTCTACT AGAAATATGT CAAATCTGTT GAATGTTGCT CTCCAATATC TACTCTTGGG TTCTGTTGGA AATAGGACGA AGTGGTTAAA GAAGAAGAAT GATTCTTTTG TGTTTTGTTT TCGAATAAGA GAGAACATGT TATGTTCTGA TGAAAGCAGT TCTTGTTTGT GTT |
| Length | 1453 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 2135570.. 2137586 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G25572.1 |
| Description | conserved peptide upstream open reading frame 11 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF11 represents a conserved upstream opening reading frame relative to major ORF AT3G25570.1 |
| Alias | [CPuORF11][conserved peptide upstream open reading frame 11] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 12.2474 |
Ahg915595 | Disease resistance protein (TIR-NBS-LRR class) family |
| 18.8414 |
Ahg486597 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 27.6767 |
Ahg482229 | TRAF-like family protein |
| 41.7373 |
Ahg908915 | Mannose-binding lectin superfamily protein |
| 50.05 |
Ahg490488 | TRAF-like family protein |
| 63.1664 |
Ahg933866 | TRAF-like family protein |
| 63.7966 |
Ahg494441 | solute:sodium symporters;urea transmembrane transporters |
| 67.3053 |
Ahg480666 | |
| 69.5989 |
Ahg492886 | phloem protein 2-A1 |
| 71.638 |
Ahg943129 | Copper amine oxidase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|