Detail



ID : Ahg484482

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484482|fgenesh2_kg.5__474__AT3G26940.1
Sequence
ATTTTAATCT AAATCTCCTT CCTTATCACC TCACAAAATT TCTCGTATTT TTGTAATCTA TTTTTGATCG AATCTGTTGA TCGTGTGTTT CTTGGGGATT TTTTTGATTC CTTCAAAGTT TTCATCTTTT TTTATAACAA AACCGTTAAT TCTTTGTCAT CGTGTGTGAT CTCTTGAGCC CTATTGATAA ACCATATAGA GAGAGAGTGT GTGTGTGTGT ATCTTTGTTT ATTGAGTGAC ACCAACAAAA AAGAGATTAT TTTCCTTGAG ATTAATAACA TGGCTTGTTG CTTGTGTTTT GGTCCCGGTC GGAAAATGAA GCTCCAAGAC AATTCTGATC AGATATCCAT ACGTAACCAG GCTAACCAGC CATCCTCCTC TTCTGCCCAA CCAGCTGCAA CAGTAGCAAT ACCTTCGTCA AGTTCACAAA CAGTAGTGCA AGATTCTGCT AGATACAGAT GTCAGATTTT CTCATACCGA GAACTCGCCA TTGCGACTAA CAGCTTCAGG GAAGAATCTT TGATCGGAAG AGGTGGATTC GGAGCTGTGT ATAAAGGAAG GCTAAACAAT GGAAAGAACA TAGCTGTTAA AGTGCTTGAT CAGTCTGGTG TTCAAGGAGA CAAAGAGTTT CTTGTGGAAG TCCTAATGCT CTCTCTCTTG CACCACCAAA ACCTTGTGCA TTTGTTCGGT TATTGCGCTG AAGGCGATCA AAGACTCCTT GTCTATGAAT ACATGCCTCT TGGATCTGTA GAAGATCATC TTTACGATCT TAGTGATGGT CAAGAGGCTT TAGATTGGAA CACAAGGATG CAGATAGCCC TAGGAGCGGC TAAAGGGTTA GCGTTTCTTC ACAACGAAGC AACACCTGCG GTGATATACA GAGATTTGAA AACTTCAAAC ATATTGTTGG ATCATGAATA TAAACCGAAG CTCTCTGATT TTGGACTTGC TAAGTTTGGT CCTAGTGGTG ATATGTCTCA TGTCTCTACT AGAGTTATGG GAACTCATGG GTATTGTGCA CCAGAGTACG CGAACACCGG GAAATTGACG CTGAAATCTG ATATTTATAG CCTTGGAGTT GTGATGTTGG AGCTTATCAC TGGACGCAAA GCTCTTTTGC CCTCATCCGA ATGCGTTGGT ACTCAAAGTC GCTATCTTGT GCATTGGGCA CGACAATTGT GGTTGGATGG CAAAGTAATG CAGATTGTAG ATCCAATGTT ATTAACAAAA GGCCGTTTAT CGAGTATCGT TGTTTTTAGA AGTATCGAAG TGGCAATGAA GTGTCTAATG GAAGAAGCAA ACGCTAGACC ATTGATCAGC GAGGTCGTGG ATTCTCTAAG ATATATCGTT GATCACACAA TGAGGAAAGA AAGGAGCAGG CTTAGACGAG AAGGAAATAT GGATGGGGCG GGGACATCGA GCTCACCGGA TGAGACGAGA AGGATGTTTA CGGTTAGAGA AGAAGGAGAA AGTCCTGAAG AAGCTATTGA GAGAAGGAGA CTAGTCGTGG ATGATGCTCT TACTTGGGCC GGCGTGAATC GGCCGAGAGG GACTACGCCA CCAACGCCGA GTCCATGAAA GTGAAGAAAC TTTTTTATTT AACTGTTTTT CAAGTTATAT TTGGTTCAGT TTGTTTGGTG TGACTATTGT TAGAAAATAA CTTTTATTAA AAATCTAGTT AATACTAG 
Length1688
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3114168.. 3116699
Download Sequence
A.thaliana
AGI-codeAT3G26940.1
DescriptionProtein kinase superfamily protein
TAIR curator summaryReceptor-like cytoplasmic kinase, RLCKVII subfamily. Overexpression causes abnormal differential and elongation growth after organ differentiation.
Alias[CDG1][CONSTITUTIVE DIFFERENTIAL GROWTH 1]
Gene coexpression
MR
MR Locus Description
6.9282 Ahg483920 Signal transduction histidine kinase
20.8327 Ahg921700 ENTH/VHS/GAT family protein
22.2486 Ahg497026 transposable element gene
25.4558 Ahg942188 Plant self-incompatibility protein S1 family
26.1725 Ahg486927 cation exchanger 4
26.8514 Ahg493352 HXXXD-type acyl-transferase family protein
28.2135 Ahg351608 Protein of Unknown Function (DUF239)
28.3725 Ahg930794 transposable element gene
29.6648 Ahg321478 Fatty acid hydroxylase superfamily
29.6985 Ahg351609 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression