| Annotation |
|---|
| Description | jgi|Araly1|484486|fgenesh2_kg.5__478__AT3G27010.1 |
| Sequence |
GTAAATTCCC AAAAGAAAAA AAAAAAACTC GATACCTTTT CTTTTACAAA GTCGTCACAA TTCTCAAACC CTTAATTGAA TCCAAGAGAA AGAGAGAATT TTGATTAATT TAAGTCTGGA CCCTGAAGTC CCCACACAAG CAAGCTTCGA TGGATCCCAA GAACCTAAAT CGACACCAAG TACCAAATTT CTTGAACCCA CCACCACCAC GAAATCAGGG TTTGGGAGAT GGTGTTGTTG TTTCCGACGA CAAGGACGAG AATCGCAAAC CAACATCTGA GATTAAAGAT TTCCAGATCG TGGTCTCTGC TTCCGACAAA GAACCAAACA CTAAGAAGAC TCAGAATCAG AACCAGCTTG GTCCTAAGCG AAGCTCTAAC AAAGACAGAC ACACTAAAGT CGAAGGTAGA GGTCGAAGAA TTCGGATGCC TGCTCTTTGT GCTGCTAGAA TTTTTCAATT GACTAGAGAA TTGGGTCATA AATCGGATGG TGAAACAATC CAGTGGCTGC TTCAACAAGC TGAGCCATCG ATTATTGCAG CCACCGGTTC AGGAACTATA CCTGCCTCTG CTTTAGCTTC AGCTGCAAGC TCTGTCTCTA ACCATCATCA AGGTGGGTCT CTTACTACTG GTTTAATGAT CAGTCATGAC TTAGATGGTG GGTCTAGTAG TGGTAGACCA TTAAATTGGG GAATTGGTGG AGGTGAAGGA GCTTCTAGGT CAAATTTACC AACTGGGTTG TGGCCAAATG TAGCTGGGTT TGGTTCTGGT GTACCAACTA CTGGGTTGAT GAGTGAAGGA GCTGGGTATA GAATTGGGTT TCCTGGTTTT GAGTTTCCTG GTGTTGGTCC TATGAGTTTT GCATCTATTT TGGGTGGTGC TGGTGGGAAT CATAATCAGA TGCCTGGACT TGAGTTAGGG TTGTCTCAAG AAGGGAATGT TGGGGTTTTG AATCCTCAGT CTTTTACTCA GATTTATCAA CAGATGGGTC AAGCTCAAGC TCAGGCTCAG GCTCAAGGTA GGGTTCTTCA CCATATGCAT CATAACCATG AAGATCATCA GCAAGAGAGT GGTGAGAAAG ATGATTCTCA AGGCTCAGGT CGTTAAAGGA TTGTTTTTTT TTTATCTTCT GGATTTGAAA AGCTTTTGGC TTTTGTTTTG TGATAATATT GTTGTAATTT GTATCACTAT GGAGAAGAAA AAGAAAAAGG AAAAGGTTTT ATACTGAGTG AGAGTGATAA TCTATACTTA TTGAAACCTC TGCAAAAACA CAGGGTGGAG TTTGTTGATA CACAAAGCCA AAGATTTTTT TGTTTGGAGT CTTTAAGTTC CAGAGAGGCT TGTTTTTACT TATTCTCTGT GTTGTTGCTT TTGAATATCA AGAAACCGGC TTTTTTCAAT AGTAACAACA ATGGTAATGT ATACTTGTCT TCCATCAC |
| Length | 1438 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 3142648.. 3144138 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G27010.1 |
| Description | TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 |
| TAIR curator summary | Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. |
| Alias | [AT-TCP20][ATTCP20][PCF1][TCP20][ARABIDOPSIS THALIANA TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20][TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.1489 |
Ahg493966 | RING/U-box superfamily protein |
| 12.9615 |
Ahg476021 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 48.6313 |
Ahg496290 | cytochrome P450, family 89, subfamily A, polypeptide 3 |
| 75.0733 |
Ahg488086 | annexin 8 |
| 76.5245 |
Ahg479554 | ethylene response factor 7 |
| 82.1949 |
Ahg494865 | Pectin lyase-like superfamily protein |
| 83.2827 |
Ahg912607 | nucleic acid binding |
| 89.9333 |
Ahg933473 | F-box/RNI-like superfamily protein |
| 91.34 |
Ahg916296 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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