Detail



ID : Ahg484545

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484545|fgenesh2_kg.5__537__AT3G27550.1
Sequence
ATGAATCAAG TGTTTAAGGG ATGGTATCGA GGTATGTCAA CATCGAGAGG AAGGAGTATG AGGAGCAAAG TGGAGAGTAG AATGAGGAAA GAGTCTGGTA AGACGTTAAG AGAGATTAGA AGAGCTAAGA AGTTGAAGAA GAAACTCATG ACTGATGAAG AAAGACTCAT TTACAATCTC AAAAGGGCGA AGAAGAAAGT TGCGCTTTTG TTGCAAAAGC TTAAGAAGTA TGATCTTCCT GAGCTGCCAT CTCCGGTGCA TGATCCCGAG CTTTTCACAT CTGAGCAGGT TCAAGCGTTC AAGAAAATCG GTTTCAAGAA CAAAAACTAT GTTCCTGTTG GTGTTCGTGG AGTCTTTGGA GGAGTGGTAC AAAATATGCA TATGCACTGG AAGTTTCATG AGACTGTTCA AGTTTGTTGC GATAACTTCC CTAAGGAAAA GATTAAAGAG ATGGCGAGCA TGATAGCGAG ACTGAGCGGC GGGGTAGTCA TTAACATACA TAATGTAAAA ACTATTATTA TGTTCCGTGG TAGAAACTAC CGGCAGCCCA AGAACCTAAT CCCTGTCAAC ACCCTCACGA AACGGAAGGC TTTATTCAAA GCCAGATTCG AACAAGCGCT TGAGTCTCAG AAGCTGAACA TAAAGAAAAC AGAACAGCAG CTACGGAGAA TGGGTGTTAA CCCTGAAGAT CCGGTTGCAA TGGCTAGCAT CCAGAGAGTG GCCTCAACAT TTTTCAATGC AATCGACAAA AAGGAAGGAA CCCCGTATGT CTTCCATGGA GGTAAACAAT CAGAACGAGG CGCTAGTGAT GACAATAGAG AAGAATCAGA ACCGGGTGAT GAAGATAGTG ACCAGGAGGA GCTAGACAGA TTCATAGCTG AGATAGAAGA AGCAGCAGAC AAGGAGTGGG AGGAAGAAGA AGCTGCAGAG CAAGAGGAAT CTGGTAGGAT AAGGTATTGG AACCGAGAAG AGTTTGCAGG AAGAAGCAGA ACACCTGAAT TGCGTAGTTA TGGAGATGCA AGTCATGGCT TTAGAAGAAA TGAAAGGGAT ACACATAGCC AGAGGAGACC CAACGATAGT GATGAAGATG ACGACGGTGA ATTGGATTCT GAGGATGATG AAATTCCAAA GAGATTTGAT AGAGCAAGAT CATCAAACAT AAACACAAGA AGGCCGAGAG AGGATTTTAA GAGAAGAAGC CCCGATCCTC GACCTCGACC TCAAGTGAGA AGTGATGACG ATGTATTGAG TGATCTTGAT AACACAATGT GGGATTCAGA AGATGAAGAA GATGCACCAC CGGCTAATTA CATTTCGAGC AGTGATGATG ACGAGGATGA AAACAGAACG ATATCAGCAT CAGCATCTAA ACAACCGAGA TTCAGGAACA ATAGTTCAAG AGATGGTATC AACAATTCAA AGACTAAGAG TGGAAAGCAG ACGGACGAGG ATTGGGATAG TGATTAGATA TGAAGACTAC GAGATCACAG AGCTTCTGAT ATTGTTATTT GTCTTCATTG GCGCTTAACT ATGAAAGATG TTAAACTCTG GTCTGAATAT TGAAGGCTGA TCTATCTATT GTTAGGTTCA GTGAAAGATA AAGAACATGA TAAGCCAAAT TCTGTTCTTT GCATTTGTAA TTCAGATTCT GGTATTAGTG GCAAATTAAG ATGATTTGTA TG 
Length1682
Protein Sequence
Protein Residue
Map Locationscaffold_5: 3660281.. 3662396
Download Sequence
A.thaliana
AGI-codeAT3G27550.1
DescriptionRNA-binding CRS1 / YhbY (CRM) domain protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.0499 Ahg325654 transducin family protein / WD-40 repeat family protein
20.347 Ahg474332 tRNAse Z3
23.5372 Ahg494878
26.8328 Ahg471752 Tetratricopeptide repeat (TPR)-like superfamily protein
32.4037 Ahg311923 F-box family protein
33.0454 Ahg485282 Pentatricopeptide repeat (PPR) superfamily protein
35.1994 Ahg942410 Pre-rRNA-processing protein TSR2, conserved region
40.9268 Ahg482091 ARM repeat superfamily protein
40.9878 Ahg311450 nuclear assembly factor 1
47.0213 Ahg474250 DEA(D/H)-box RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression